Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lhx4P53776 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Lhx4P53776 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lhx4P53776 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx4P53776 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx4P53776 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.02■□□□□ 0.79
Lhx4P53776 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx4P53776 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx4P53776 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Lhx4P53776 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx4P53776 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lhx4P53776 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx4P53776 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx4P53776 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx4P53776 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx4P53776 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx4P53776 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Lhx4P53776 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx4P53776 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx4P53776 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx4P53776 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx4P53776 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx4P53776 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx4P53776 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx4P53776 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx4P53776 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx4P53776 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lhx4P53776 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.95■□□□□ 0.78
Lhx4P53776 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx4P53776 Gm6821-201ENSMUST00000107540 542 ntBASIC19.95■□□□□ 0.78
Lhx4P53776 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx4P53776 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Lhx4P53776 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx4P53776 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx4P53776 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx4P53776 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx4P53776 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx4P53776 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.91■□□□□ 0.78
Lhx4P53776 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx4P53776 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx4P53776 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx4P53776 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx4P53776 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx4P53776 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
Lhx4P53776 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx4P53776 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx4P53776 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx4P53776 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx4P53776 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx4P53776 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx4P53776 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.88■□□□□ 0.77
Lhx4P53776 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx4P53776 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx4P53776 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx4P53776 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx4P53776 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx4P53776 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx4P53776 Gm8503-201ENSMUST00000118131 455 ntBASIC19.86■□□□□ 0.77
Lhx4P53776 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx4P53776 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx4P53776 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx4P53776 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx4P53776 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.84■□□□□ 0.77
Lhx4P53776 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.84■□□□□ 0.77
Lhx4P53776 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx4P53776 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx4P53776 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Lhx4P53776 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.83■□□□□ 0.77
Lhx4P53776 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx4P53776 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx4P53776 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Lhx4P53776 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx4P53776 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Lhx4P53776 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx4P53776 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Lhx4P53776 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.82■□□□□ 0.76
Lhx4P53776 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lhx4P53776 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx4P53776 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.81■□□□□ 0.76
Lhx4P53776 Nkain2-201ENSMUST00000092602 558 ntBASIC19.81■□□□□ 0.76
Lhx4P53776 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx4P53776 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.8■□□□□ 0.76
Lhx4P53776 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx4P53776 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lhx4P53776 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx4P53776 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx4P53776 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx4P53776 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.78■□□□□ 0.76
Lhx4P53776 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Lhx4P53776 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.78■□□□□ 0.76
Lhx4P53776 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx4P53776 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx4P53776 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx4P53776 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Lhx4P53776 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx4P53776 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lhx4P53776 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx4P53776 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx4P53776 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx4P53776 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 367.9 ms