Protein–RNA interactions for Protein: P33420

NIP100, Protein NIP100, yeastyeast

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP100P33420 tE(CUC)DtE(CUC)D 72 nt9.03□□□□□ -0.96
NIP100P33420 tE(CUC)ItE(CUC)I 72 nt9.03□□□□□ -0.96
NIP100P33420 YDR467CYDR467C 327 nt9.03□□□□□ -0.96
NIP100P33420 HXK1YFR053C 1458 nt9.02□□□□□ -0.96
NIP100P33420 SBP1YHL034C 885 nt9.02□□□□□ -0.97
NIP100P33420 REX2YLR059C 810 nt9.02□□□□□ -0.97
NIP100P33420 IGD1YFR017C 588 nt9.01□□□□□ -0.97
NIP100P33420 GPM1YKL152C 744 nt9□□□□□ -0.97
NIP100P33420 NSG2YNL156C 900 nt9□□□□□ -0.97
NIP100P33420 GNP1YDR508C 1992 nt9□□□□□ -0.97
NIP100P33420 ALD5YER073W 1563 nt8.99□□□□□ -0.97
NIP100P33420 THI3YDL080C 1830 nt8.99□□□□□ -0.97
NIP100P33420 YMR316C-BYMR316C-B 309 nt8.99□□□□□ -0.97
NIP100P33420 GGA2YHR108W 1758 nt8.99□□□□□ -0.97
NIP100P33420 YOR072WYOR072W 315 nt8.97□□□□□ -0.97
NIP100P33420 NPP2YEL016C 1482 nt8.96□□□□□ -0.97
NIP100P33420 PHB2YGR231C 933 nt8.96□□□□□ -0.98
NIP100P33420 YKR012CYKR012C 378 nt8.95□□□□□ -0.98
NIP100P33420 YPT11YNL304W 1254 nt8.95□□□□□ -0.98
NIP100P33420 SDS24YBR214W 1584 nt8.95□□□□□ -0.98
NIP100P33420 YRF1-3YGR296W 5580 nt8.94□□□□□ -0.98
NIP100P33420 YRF1-6YNL339C 5580 nt8.94□□□□□ -0.98
NIP100P33420 YRF1-7YPL283C 5580 nt8.94□□□□□ -0.98
NIP100P33420 GAS1YMR307W 1680 nt8.94□□□□□ -0.98
NIP100P33420 ADH3YMR083W 1128 nt8.94□□□□□ -0.98
NIP100P33420 YBL095WYBL095W 813 nt8.94□□□□□ -0.98
NIP100P33420 YLR173WYLR173W 1827 nt8.94□□□□□ -0.98
NIP100P33420 VBA3YCL069W 1377 nt8.92□□□□□ -0.98
NIP100P33420 PTC6YCR079W 1329 nt8.92□□□□□ -0.98
NIP100P33420 NBA1YOL070C 1506 nt8.91□□□□□ -0.98
NIP100P33420 tA(AGC)DtA(AGC)D 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)FtA(AGC)F 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)GtA(AGC)G 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)HtA(AGC)H 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)JtA(AGC)J 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)K1tA(AGC)K1 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)K2tA(AGC)K2 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)LtA(AGC)L 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)M1tA(AGC)M1 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)M2tA(AGC)M2 73 nt8.9□□□□□ -0.98
NIP100P33420 tA(AGC)PtA(AGC)P 73 nt8.9□□□□□ -0.98
NIP100P33420 FLX1YIL134W 936 nt8.89□□□□□ -0.99
NIP100P33420 SEN2YLR105C 1134 nt8.89□□□□□ -0.99
NIP100P33420 MTO1YGL236C 2010 nt8.88□□□□□ -0.99
NIP100P33420 IPL1YPL209C 1104 nt8.88□□□□□ -0.99
NIP100P33420 TOM71YHR117W 1920 nt8.88□□□□□ -0.99
NIP100P33420 AAC3YBR085W 924 nt8.87□□□□□ -0.99
NIP100P33420 TPN1YGL186C 1740 nt8.86□□□□□ -0.99
NIP100P33420 FET5YFL041W 1869 nt8.86□□□□□ -0.99
NIP100P33420 LYS20YDL182W 1287 nt8.86□□□□□ -0.99
NIP100P33420 YMC2YBR104W 990 nt8.86□□□□□ -0.99
NIP100P33420 ENO1YGR254W 1314 nt8.85□□□□□ -0.99
NIP100P33420 MOB1YIL106W 945 nt8.85□□□□□ -0.99
NIP100P33420 YJL064WYJL064W 396 nt8.85□□□□□ -0.99
NIP100P33420 YIL177CYIL177C 5277 nt8.84□□□□□ -0.99
NIP100P33420 YFR020WYFR020W 699 nt8.83□□□□□ -1
NIP100P33420 PAU19YMR325W 375 nt8.83□□□□□ -1
NIP100P33420 TMS1YDR105C 1422 nt8.82□□□□□ -1
NIP100P33420 MRS4YKR052C 915 nt8.82□□□□□ -1
NIP100P33420 AAT1YKL106W 1356 nt8.82□□□□□ -1
NIP100P33420 YDR306CYDR306C 1437 nt8.81□□□□□ -1
NIP100P33420 RSM7YJR113C 744 nt8.81□□□□□ -1
NIP100P33420 NAP1YKR048C 1254 nt8.81□□□□□ -1
NIP100P33420 MEX67YPL169C 1800 nt8.8□□□□□ -1
NIP100P33420 CYC3YAL039C 810 nt8.8□□□□□ -1
NIP100P33420 SRP102YKL154W 735 nt8.8□□□□□ -1
NIP100P33420 THI6YPL214C 1623 nt8.78□□□□□ -1
NIP100P33420 TRP2YER090W 1524 nt8.78□□□□□ -1
NIP100P33420 RTG2YGL252C 1767 nt8.78□□□□□ -1
NIP100P33420 YCR025CYCR025C 411 nt8.76□□□□□ -1.01
NIP100P33420 HXT11YOL156W 1704 nt8.76□□□□□ -1.01
NIP100P33420 YLR072WYLR072W 2082 nt8.76□□□□□ -1.01
NIP100P33420 YIR035CYIR035C 765 nt8.75□□□□□ -1.01
NIP100P33420 YLR280CYLR280C 351 nt8.75□□□□□ -1.01
NIP100P33420 snR86snR86 1004 nt8.74□□□□□ -1.01
NIP100P33420 EMC3YKL207W 762 nt8.74□□□□□ -1.01
NIP100P33420 ERO1YML130C 1692 nt8.73□□□□□ -1.01
NIP100P33420 MIM1YOL026C 342 nt8.73□□□□□ -1.01
NIP100P33420 SNU66YOR308C 1764 nt8.72□□□□□ -1.01
NIP100P33420 YBR056WYBR056W 1506 nt8.72□□□□□ -1.01
NIP100P33420 SER2YGR208W 930 nt8.72□□□□□ -1.01
NIP100P33420 PUP1YOR157C 786 nt8.72□□□□□ -1.01
NIP100P33420 tD(GUC)BtD(GUC)B 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)DtD(GUC)D 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)G1tD(GUC)G1 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)G2tD(GUC)G2 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)I1tD(GUC)I1 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)I2tD(GUC)I2 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)J1tD(GUC)J1 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)J2tD(GUC)J2 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)J3tD(GUC)J3 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)J4tD(GUC)J4 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)KtD(GUC)K 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)L1tD(GUC)L1 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)L2tD(GUC)L2 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)MtD(GUC)M 72 nt8.71□□□□□ -1.02
NIP100P33420 tD(GUC)OtD(GUC)O 72 nt8.71□□□□□ -1.02
NIP100P33420 BUB2YMR055C 921 nt8.7□□□□□ -1.02
NIP100P33420 ADE2YOR128C 1716 nt8.69□□□□□ -1.02
NIP100P33420 YJL009WYJL009W 327 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 69.6 ms