Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.64■■□□□ 1.22
Slc6a11P31650 Gm24970-201ENSMUST00000175582 82 ntBASIC22.64■■□□□ 1.21
Slc6a11P31650 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.64■■□□□ 1.21
Slc6a11P31650 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a11P31650 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a11P31650 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a11P31650 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a11P31650 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a11P31650 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slc6a11P31650 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Slc6a11P31650 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slc6a11P31650 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slc6a11P31650 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Slc6a11P31650 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Slc6a11P31650 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.6■■□□□ 1.21
Slc6a11P31650 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Slc6a11P31650 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a11P31650 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Slc6a11P31650 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Slc6a11P31650 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.58■■□□□ 1.21
Slc6a11P31650 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.58■■□□□ 1.21
Slc6a11P31650 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Slc6a11P31650 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Slc6a11P31650 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a11P31650 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.57■■□□□ 1.2
Slc6a11P31650 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a11P31650 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.57■■□□□ 1.2
Slc6a11P31650 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a11P31650 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a11P31650 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.56■■□□□ 1.2
Slc6a11P31650 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a11P31650 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Slc6a11P31650 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a11P31650 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a11P31650 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a11P31650 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a11P31650 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.54■■□□□ 1.2
Slc6a11P31650 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.54■■□□□ 1.2
Slc6a11P31650 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a11P31650 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a11P31650 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a11P31650 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a11P31650 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a11P31650 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a11P31650 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a11P31650 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a11P31650 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.48■■□□□ 1.19
Slc6a11P31650 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a11P31650 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a11P31650 Gm8503-201ENSMUST00000118131 455 ntBASIC22.47■■□□□ 1.19
Slc6a11P31650 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a11P31650 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.46■■□□□ 1.19
Slc6a11P31650 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a11P31650 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.45■■□□□ 1.18
Slc6a11P31650 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a11P31650 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a11P31650 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.44■■□□□ 1.18
Slc6a11P31650 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a11P31650 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Slc6a11P31650 Gm6821-201ENSMUST00000107540 542 ntBASIC22.42■■□□□ 1.18
Slc6a11P31650 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc6a11P31650 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Slc6a11P31650 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Slc6a11P31650 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Slc6a11P31650 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc6a11P31650 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Slc6a11P31650 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc6a11P31650 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Slc6a11P31650 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc6a11P31650 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.36■■□□□ 1.17
Slc6a11P31650 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc6a11P31650 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.36■■□□□ 1.17
Slc6a11P31650 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc6a11P31650 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc6a11P31650 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc6a11P31650 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc6a11P31650 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc6a11P31650 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc6a11P31650 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Slc6a11P31650 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc6a11P31650 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc6a11P31650 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc6a11P31650 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Slc6a11P31650 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Slc6a11P31650 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Slc6a11P31650 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a11P31650 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.29■■□□□ 1.16
Slc6a11P31650 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc6a11P31650 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Slc6a11P31650 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Slc6a11P31650 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc6a11P31650 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a11P31650 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a11P31650 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a11P31650 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a11P31650 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Slc6a11P31650 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Slc6a11P31650 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Slc6a11P31650 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Slc6a11P31650 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms