Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn1P18608 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn1P18608 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn1P18608 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.83■■□□□ 1.09
Hmgn1P18608 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.83■■□□□ 1.09
Hmgn1P18608 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn1P18608 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hmgn1P18608 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Hmgn1P18608 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn1P18608 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgn1P18608 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Hmgn1P18608 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn1P18608 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn1P18608 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn1P18608 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn1P18608 Gm16148-201ENSMUST00000119653 893 ntBASIC21.79■■□□□ 1.08
Hmgn1P18608 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn1P18608 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn1P18608 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Hmgn1P18608 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgn1P18608 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Hmgn1P18608 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hmgn1P18608 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn1P18608 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn1P18608 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn1P18608 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn1P18608 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn1P18608 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn1P18608 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn1P18608 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn1P18608 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn1P18608 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn1P18608 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn1P18608 Gm24804-201ENSMUST00000174982 85 ntBASIC21.74■■□□□ 1.07
Hmgn1P18608 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.74■■□□□ 1.07
Hmgn1P18608 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn1P18608 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hmgn1P18608 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hmgn1P18608 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hmgn1P18608 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn1P18608 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn1P18608 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Hmgn1P18608 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn1P18608 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgn1P18608 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Hmgn1P18608 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgn1P18608 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgn1P18608 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Hmgn1P18608 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn1P18608 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.69■■□□□ 1.06
Hmgn1P18608 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn1P18608 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn1P18608 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn1P18608 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn1P18608 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn1P18608 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn1P18608 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn1P18608 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgn1P18608 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn1P18608 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn1P18608 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn1P18608 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn1P18608 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn1P18608 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn1P18608 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Hmgn1P18608 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hmgn1P18608 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Hmgn1P18608 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgn1P18608 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.64■■□□□ 1.05
Hmgn1P18608 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Hmgn1P18608 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgn1P18608 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgn1P18608 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgn1P18608 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgn1P18608 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgn1P18608 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Hmgn1P18608 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgn1P18608 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Hmgn1P18608 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgn1P18608 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgn1P18608 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.6■■□□□ 1.05
Hmgn1P18608 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgn1P18608 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgn1P18608 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgn1P18608 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgn1P18608 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Hmgn1P18608 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.57■■□□□ 1.04
Hmgn1P18608 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgn1P18608 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgn1P18608 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgn1P18608 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgn1P18608 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms