Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd48P18181 Zfp131-205ENSMUST00000223812 663 ntBASIC21.26■□□□□ 0.99
Cd48P18181 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd48P18181 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd48P18181 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd48P18181 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd48P18181 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd48P18181 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd48P18181 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.22■□□□□ 0.99
Cd48P18181 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd48P18181 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cd48P18181 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd48P18181 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cd48P18181 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.21■□□□□ 0.99
Cd48P18181 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd48P18181 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd48P18181 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd48P18181 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.19■□□□□ 0.98
Cd48P18181 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.19■□□□□ 0.98
Cd48P18181 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd48P18181 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd48P18181 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd48P18181 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd48P18181 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.17■□□□□ 0.98
Cd48P18181 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cd48P18181 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd48P18181 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Cd48P18181 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cd48P18181 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd48P18181 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cd48P18181 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cd48P18181 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd48P18181 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd48P18181 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.15■□□□□ 0.98
Cd48P18181 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cd48P18181 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd48P18181 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Cd48P18181 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd48P18181 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.13■□□□□ 0.97
Cd48P18181 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cd48P18181 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd48P18181 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd48P18181 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Cd48P18181 Gm24970-201ENSMUST00000175582 82 ntBASIC21.12■□□□□ 0.97
Cd48P18181 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd48P18181 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd48P18181 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd48P18181 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd48P18181 Gm9397-201ENSMUST00000200125 605 ntBASIC21.11■□□□□ 0.97
Cd48P18181 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.1■□□□□ 0.97
Cd48P18181 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.1■□□□□ 0.97
Cd48P18181 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd48P18181 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd48P18181 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.09■□□□□ 0.97
Cd48P18181 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd48P18181 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.08■□□□□ 0.97
Cd48P18181 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.08■□□□□ 0.97
Cd48P18181 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Cd48P18181 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.08■□□□□ 0.96
Cd48P18181 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd48P18181 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd48P18181 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cd48P18181 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd48P18181 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd48P18181 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd48P18181 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd48P18181 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Cd48P18181 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Cd48P18181 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd48P18181 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cd48P18181 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.04■□□□□ 0.96
Cd48P18181 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.04■□□□□ 0.96
Cd48P18181 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd48P18181 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd48P18181 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd48P18181 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd48P18181 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd48P18181 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cd48P18181 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd48P18181 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd48P18181 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.02■□□□□ 0.96
Cd48P18181 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cd48P18181 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd48P18181 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cd48P18181 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cd48P18181 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd48P18181 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21■□□□□ 0.95
Cd48P18181 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cd48P18181 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd48P18181 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd48P18181 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Cd48P18181 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cd48P18181 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd48P18181 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd48P18181 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cd48P18181 Gm45855-201ENSMUST00000212546 880 ntBASIC20.97■□□□□ 0.95
Cd48P18181 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cd48P18181 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cd48P18181 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd48P18181 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms