Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06323 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06323 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P06323 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06323 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P06323 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.14■□□□□ 0.66
P06323 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P06323 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P06323 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P06323 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.14■□□□□ 0.65
P06323 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.13■□□□□ 0.65
P06323 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06323 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06323 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06323 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.11■□□□□ 0.65
P06323 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06323 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06323 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P06323 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06323 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06323 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06323 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06323 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
P06323 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.09■□□□□ 0.65
P06323 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06323 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06323 Zfp131-205ENSMUST00000223812 663 ntBASIC19.08■□□□□ 0.64
P06323 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
P06323 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
P06323 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06323 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06323 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06323 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P06323 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06323 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.06■□□□□ 0.64
P06323 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
P06323 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
P06323 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06323 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06323 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06323 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06323 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.03■□□□□ 0.64
P06323 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.03■□□□□ 0.64
P06323 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.03■□□□□ 0.64
P06323 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06323 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06323 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
P06323 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
P06323 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
P06323 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
P06323 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P06323 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
P06323 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
P06323 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19■□□□□ 0.63
P06323 Tdp2-203ENSMUST00000223804 1136 ntBASIC19■□□□□ 0.63
P06323 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P06323 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.99■□□□□ 0.63
P06323 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
P06323 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P06323 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.98■□□□□ 0.63
P06323 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
P06323 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
P06323 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P06323 Gm9397-201ENSMUST00000200125 605 ntBASIC18.97■□□□□ 0.63
P06323 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.97■□□□□ 0.63
P06323 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P06323 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
P06323 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.96■□□□□ 0.63
P06323 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
P06323 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P06323 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P06323 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P06323 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P06323 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P06323 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P06323 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P06323 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.95■□□□□ 0.62
P06323 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P06323 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P06323 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P06323 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P06323 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
P06323 Gm24970-201ENSMUST00000175582 82 ntBASIC18.94■□□□□ 0.62
P06323 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P06323 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
P06323 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.93■□□□□ 0.62
P06323 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.93■□□□□ 0.62
P06323 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P06323 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P06323 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
P06323 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
P06323 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
P06323 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P06323 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
P06323 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
P06323 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.91■□□□□ 0.62
P06323 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P06323 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P06323 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P06323 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms