Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PdgfrbP05622 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PdgfrbP05622 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PdgfrbP05622 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PdgfrbP05622 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PdgfrbP05622 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PdgfrbP05622 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PdgfrbP05622 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PdgfrbP05622 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PdgfrbP05622 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.19■■□□□ 1.46
PdgfrbP05622 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PdgfrbP05622 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PdgfrbP05622 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.17■■□□□ 1.46
PdgfrbP05622 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PdgfrbP05622 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PdgfrbP05622 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.16■■□□□ 1.46
PdgfrbP05622 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PdgfrbP05622 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PdgfrbP05622 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PdgfrbP05622 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PdgfrbP05622 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PdgfrbP05622 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PdgfrbP05622 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PdgfrbP05622 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PdgfrbP05622 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PdgfrbP05622 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PdgfrbP05622 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PdgfrbP05622 Gm30023-201ENSMUST00000197970 889 ntBASIC24.08■■□□□ 1.45
PdgfrbP05622 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
PdgfrbP05622 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
PdgfrbP05622 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PdgfrbP05622 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PdgfrbP05622 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PdgfrbP05622 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PdgfrbP05622 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PdgfrbP05622 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.05■■□□□ 1.44
PdgfrbP05622 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.05■■□□□ 1.44
PdgfrbP05622 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PdgfrbP05622 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.04■■□□□ 1.44
PdgfrbP05622 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.04■■□□□ 1.44
PdgfrbP05622 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfrbP05622 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfrbP05622 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfrbP05622 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PdgfrbP05622 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PdgfrbP05622 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PdgfrbP05622 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PdgfrbP05622 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PdgfrbP05622 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.02■■□□□ 1.44
PdgfrbP05622 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
PdgfrbP05622 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PdgfrbP05622 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
PdgfrbP05622 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
PdgfrbP05622 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PdgfrbP05622 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PdgfrbP05622 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PdgfrbP05622 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PdgfrbP05622 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24■■□□□ 1.43
PdgfrbP05622 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PdgfrbP05622 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
PdgfrbP05622 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfrbP05622 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfrbP05622 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfrbP05622 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfrbP05622 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.97■■□□□ 1.43
PdgfrbP05622 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfrbP05622 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfrbP05622 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfrbP05622 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
PdgfrbP05622 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PdgfrbP05622 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfrbP05622 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfrbP05622 Nkain2-201ENSMUST00000092602 558 ntBASIC23.95■■□□□ 1.42
PdgfrbP05622 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfrbP05622 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PdgfrbP05622 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PdgfrbP05622 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PdgfrbP05622 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.94■■□□□ 1.42
PdgfrbP05622 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PdgfrbP05622 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PdgfrbP05622 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.93■■□□□ 1.42
PdgfrbP05622 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PdgfrbP05622 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.93■■□□□ 1.42
PdgfrbP05622 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PdgfrbP05622 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PdgfrbP05622 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PdgfrbP05622 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
PdgfrbP05622 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PdgfrbP05622 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.91■■□□□ 1.42
PdgfrbP05622 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfrbP05622 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfrbP05622 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.9■■□□□ 1.42
PdgfrbP05622 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PdgfrbP05622 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfrbP05622 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.89■■□□□ 1.42
PdgfrbP05622 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfrbP05622 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfrbP05622 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PdgfrbP05622 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfrbP05622 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms