Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hoxa3P02831 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hoxa3P02831 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxa3P02831 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa3P02831 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa3P02831 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa3P02831 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hoxa3P02831 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa3P02831 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa3P02831 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Hoxa3P02831 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa3P02831 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa3P02831 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.92■□□□□ 0.78
Hoxa3P02831 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa3P02831 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa3P02831 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.92■□□□□ 0.78
Hoxa3P02831 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa3P02831 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Hoxa3P02831 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa3P02831 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hoxa3P02831 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Hoxa3P02831 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa3P02831 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa3P02831 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hoxa3P02831 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa3P02831 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hoxa3P02831 Gm7432-201ENSMUST00000210343 879 ntBASIC19.89■□□□□ 0.77
Hoxa3P02831 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa3P02831 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa3P02831 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hoxa3P02831 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa3P02831 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa3P02831 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.87■□□□□ 0.77
Hoxa3P02831 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa3P02831 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hoxa3P02831 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa3P02831 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxa3P02831 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxa3P02831 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa3P02831 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa3P02831 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa3P02831 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa3P02831 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.85■□□□□ 0.77
Hoxa3P02831 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa3P02831 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hoxa3P02831 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.84■□□□□ 0.77
Hoxa3P02831 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.84■□□□□ 0.77
Hoxa3P02831 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
Hoxa3P02831 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa3P02831 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa3P02831 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa3P02831 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa3P02831 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxa3P02831 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.83■□□□□ 0.76
Hoxa3P02831 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.82■□□□□ 0.76
Hoxa3P02831 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa3P02831 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa3P02831 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hoxa3P02831 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa3P02831 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa3P02831 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.8■□□□□ 0.76
Hoxa3P02831 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa3P02831 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa3P02831 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa3P02831 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxa3P02831 Gm11599-201ENSMUST00000118720 878 ntBASIC19.78■□□□□ 0.76
Hoxa3P02831 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.78■□□□□ 0.76
Hoxa3P02831 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa3P02831 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
Hoxa3P02831 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa3P02831 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa3P02831 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa3P02831 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Hoxa3P02831 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.76■□□□□ 0.75
Hoxa3P02831 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa3P02831 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa3P02831 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa3P02831 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa3P02831 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa3P02831 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxa3P02831 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa3P02831 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa3P02831 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa3P02831 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa3P02831 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa3P02831 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa3P02831 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa3P02831 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa3P02831 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa3P02831 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hoxa3P02831 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa3P02831 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa3P02831 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Hoxa3P02831 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa3P02831 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa3P02831 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.67■□□□□ 0.74
Hoxa3P02831 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa3P02831 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxa3P02831 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxa3P02831 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms