Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01788 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01788 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01788 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01788 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.82■□□□□ 0.6
P01788 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01788 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01788 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01788 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01788 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01788 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01788 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01788 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
P01788 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01788 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.79■□□□□ 0.6
P01788 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01788 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
P01788 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
P01788 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01788 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01788 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
P01788 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01788 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P01788 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01788 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01788 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.75■□□□□ 0.59
P01788 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01788 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P01788 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01788 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01788 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01788 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01788 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01788 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01788 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01788 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01788 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01788 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01788 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P01788 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01788 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01788 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01788 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01788 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P01788 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01788 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01788 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01788 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
P01788 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01788 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01788 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01788 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01788 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01788 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01788 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01788 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01788 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01788 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
P01788 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01788 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01788 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01788 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P01788 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01788 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
P01788 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01788 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01788 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01788 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.6■□□□□ 0.57
P01788 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
P01788 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01788 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P01788 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P01788 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01788 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01788 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01788 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
P01788 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01788 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01788 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P01788 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
P01788 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01788 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
P01788 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01788 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01788 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01788 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01788 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P01788 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01788 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01788 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P01788 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.56■□□□□ 0.56
P01788 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.56■□□□□ 0.56
P01788 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01788 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01788 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P01788 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01788 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01788 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
P01788 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
P01788 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms