Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh2d1aO88890 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d1aO88890 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sh2d1aO88890 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d1aO88890 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d1aO88890 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d1aO88890 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d1aO88890 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d1aO88890 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sh2d1aO88890 Gm24970-201ENSMUST00000175582 82 ntBASIC16.71■□□□□ 0.27
Sh2d1aO88890 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d1aO88890 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d1aO88890 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d1aO88890 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh2d1aO88890 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d1aO88890 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d1aO88890 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.69■□□□□ 0.26
Sh2d1aO88890 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d1aO88890 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d1aO88890 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d1aO88890 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d1aO88890 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.68■□□□□ 0.26
Sh2d1aO88890 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d1aO88890 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d1aO88890 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d1aO88890 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.67■□□□□ 0.26
Sh2d1aO88890 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d1aO88890 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2d1aO88890 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Sh2d1aO88890 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2d1aO88890 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh2d1aO88890 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2d1aO88890 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2d1aO88890 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
Sh2d1aO88890 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sh2d1aO88890 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2d1aO88890 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.64■□□□□ 0.25
Sh2d1aO88890 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sh2d1aO88890 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sh2d1aO88890 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sh2d1aO88890 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2d1aO88890 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2d1aO88890 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2d1aO88890 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2d1aO88890 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.62■□□□□ 0.25
Sh2d1aO88890 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2d1aO88890 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2d1aO88890 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh2d1aO88890 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d1aO88890 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d1aO88890 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh2d1aO88890 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d1aO88890 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh2d1aO88890 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d1aO88890 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh2d1aO88890 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh2d1aO88890 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh2d1aO88890 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh2d1aO88890 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sh2d1aO88890 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d1aO88890 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d1aO88890 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh2d1aO88890 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh2d1aO88890 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sh2d1aO88890 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh2d1aO88890 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Sh2d1aO88890 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh2d1aO88890 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh2d1aO88890 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d1aO88890 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sh2d1aO88890 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d1aO88890 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d1aO88890 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d1aO88890 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d1aO88890 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh2d1aO88890 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Sh2d1aO88890 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh2d1aO88890 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d1aO88890 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sh2d1aO88890 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sh2d1aO88890 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d1aO88890 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh2d1aO88890 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Sh2d1aO88890 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh2d1aO88890 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d1aO88890 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d1aO88890 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d1aO88890 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d1aO88890 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d1aO88890 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2d1aO88890 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2d1aO88890 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms