Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hcn1O88704 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.7■■□□□ 1.22
Hcn1O88704 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Hcn1O88704 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Hcn1O88704 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.69■■□□□ 1.22
Hcn1O88704 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hcn1O88704 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Hcn1O88704 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hcn1O88704 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hcn1O88704 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hcn1O88704 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hcn1O88704 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Hcn1O88704 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hcn1O88704 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hcn1O88704 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hcn1O88704 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hcn1O88704 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hcn1O88704 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.63■■□□□ 1.21
Hcn1O88704 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hcn1O88704 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hcn1O88704 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hcn1O88704 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Hcn1O88704 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Hcn1O88704 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hcn1O88704 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hcn1O88704 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Hcn1O88704 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Hcn1O88704 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hcn1O88704 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hcn1O88704 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hcn1O88704 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Hcn1O88704 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hcn1O88704 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Hcn1O88704 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hcn1O88704 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hcn1O88704 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hcn1O88704 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hcn1O88704 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hcn1O88704 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hcn1O88704 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Hcn1O88704 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.54■■□□□ 1.2
Hcn1O88704 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hcn1O88704 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hcn1O88704 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hcn1O88704 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.53■■□□□ 1.2
Hcn1O88704 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Hcn1O88704 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hcn1O88704 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.53■■□□□ 1.2
Hcn1O88704 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Hcn1O88704 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Hcn1O88704 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hcn1O88704 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.52■■□□□ 1.2
Hcn1O88704 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hcn1O88704 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hcn1O88704 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hcn1O88704 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hcn1O88704 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
Hcn1O88704 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hcn1O88704 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hcn1O88704 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hcn1O88704 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hcn1O88704 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Hcn1O88704 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hcn1O88704 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Hcn1O88704 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hcn1O88704 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Hcn1O88704 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Hcn1O88704 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Hcn1O88704 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hcn1O88704 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hcn1O88704 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hcn1O88704 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hcn1O88704 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hcn1O88704 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hcn1O88704 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Hcn1O88704 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Hcn1O88704 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hcn1O88704 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hcn1O88704 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hcn1O88704 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hcn1O88704 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Hcn1O88704 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hcn1O88704 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hcn1O88704 Gm6821-201ENSMUST00000107540 542 ntBASIC22.41■■□□□ 1.18
Hcn1O88704 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hcn1O88704 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hcn1O88704 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.4■■□□□ 1.18
Hcn1O88704 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hcn1O88704 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Hcn1O88704 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Hcn1O88704 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.39■■□□□ 1.18
Hcn1O88704 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.39■■□□□ 1.17
Hcn1O88704 Gm8503-201ENSMUST00000118131 455 ntBASIC22.38■■□□□ 1.17
Hcn1O88704 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.38■■□□□ 1.17
Hcn1O88704 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Hcn1O88704 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Hcn1O88704 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Hcn1O88704 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hcn1O88704 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hcn1O88704 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms