Protein–RNA interactions for Protein: O88507

Cntfr, Ciliary neurotrophic factor receptor subunit alpha, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfrO88507 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CntfrO88507 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CntfrO88507 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.44■□□□□ 0.7
CntfrO88507 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.43■□□□□ 0.7
CntfrO88507 Gm30023-201ENSMUST00000197970 889 ntBASIC19.43■□□□□ 0.7
CntfrO88507 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.43■□□□□ 0.7
CntfrO88507 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CntfrO88507 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CntfrO88507 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CntfrO88507 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CntfrO88507 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CntfrO88507 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CntfrO88507 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CntfrO88507 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CntfrO88507 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CntfrO88507 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CntfrO88507 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CntfrO88507 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CntfrO88507 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.4■□□□□ 0.7
CntfrO88507 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CntfrO88507 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CntfrO88507 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CntfrO88507 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CntfrO88507 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CntfrO88507 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CntfrO88507 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CntfrO88507 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CntfrO88507 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CntfrO88507 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CntfrO88507 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CntfrO88507 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.35■□□□□ 0.69
CntfrO88507 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CntfrO88507 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
CntfrO88507 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CntfrO88507 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CntfrO88507 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.34■□□□□ 0.69
CntfrO88507 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CntfrO88507 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CntfrO88507 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CntfrO88507 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CntfrO88507 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CntfrO88507 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.32■□□□□ 0.68
CntfrO88507 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CntfrO88507 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
CntfrO88507 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CntfrO88507 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.31■□□□□ 0.68
CntfrO88507 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CntfrO88507 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CntfrO88507 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CntfrO88507 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CntfrO88507 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CntfrO88507 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CntfrO88507 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CntfrO88507 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CntfrO88507 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CntfrO88507 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CntfrO88507 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CntfrO88507 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CntfrO88507 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.28■□□□□ 0.68
CntfrO88507 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.28■□□□□ 0.68
CntfrO88507 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CntfrO88507 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CntfrO88507 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CntfrO88507 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CntfrO88507 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.26■□□□□ 0.67
CntfrO88507 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CntfrO88507 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.25■□□□□ 0.67
CntfrO88507 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CntfrO88507 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CntfrO88507 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CntfrO88507 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CntfrO88507 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CntfrO88507 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfrO88507 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfrO88507 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CntfrO88507 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CntfrO88507 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CntfrO88507 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CntfrO88507 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CntfrO88507 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfrO88507 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CntfrO88507 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfrO88507 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CntfrO88507 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.19■□□□□ 0.66
CntfrO88507 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.19■□□□□ 0.66
CntfrO88507 Gm7432-201ENSMUST00000210343 879 ntBASIC19.18■□□□□ 0.66
CntfrO88507 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CntfrO88507 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfrO88507 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfrO88507 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.17■□□□□ 0.66
CntfrO88507 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfrO88507 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfrO88507 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CntfrO88507 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CntfrO88507 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.16■□□□□ 0.66
CntfrO88507 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfrO88507 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CntfrO88507 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CntfrO88507 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfrO88507 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms