Protein–RNA interactions for Protein: O88430

Ccl22, C-C motif chemokine 22, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl22O88430 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl22O88430 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl22O88430 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl22O88430 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl22O88430 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccl22O88430 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl22O88430 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl22O88430 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Ccl22O88430 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccl22O88430 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl22O88430 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl22O88430 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.27■■□□□ 1
Ccl22O88430 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccl22O88430 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccl22O88430 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ccl22O88430 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl22O88430 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl22O88430 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl22O88430 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl22O88430 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl22O88430 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl22O88430 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.24■□□□□ 0.99
Ccl22O88430 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl22O88430 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ccl22O88430 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccl22O88430 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccl22O88430 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ccl22O88430 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl22O88430 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl22O88430 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl22O88430 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl22O88430 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccl22O88430 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.2■□□□□ 0.98
Ccl22O88430 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl22O88430 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccl22O88430 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccl22O88430 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccl22O88430 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccl22O88430 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccl22O88430 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl22O88430 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl22O88430 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl22O88430 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ccl22O88430 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl22O88430 Gm30023-201ENSMUST00000197970 889 ntBASIC21.16■□□□□ 0.98
Ccl22O88430 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccl22O88430 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl22O88430 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl22O88430 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ccl22O88430 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ccl22O88430 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ccl22O88430 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccl22O88430 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccl22O88430 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl22O88430 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl22O88430 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Ccl22O88430 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl22O88430 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.13■□□□□ 0.97
Ccl22O88430 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl22O88430 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccl22O88430 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl22O88430 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl22O88430 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl22O88430 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ccl22O88430 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl22O88430 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl22O88430 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl22O88430 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl22O88430 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Ccl22O88430 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl22O88430 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccl22O88430 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl22O88430 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccl22O88430 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.1■□□□□ 0.97
Ccl22O88430 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl22O88430 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ccl22O88430 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccl22O88430 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccl22O88430 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl22O88430 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl22O88430 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl22O88430 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl22O88430 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl22O88430 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl22O88430 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.05■□□□□ 0.96
Ccl22O88430 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccl22O88430 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccl22O88430 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccl22O88430 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Ccl22O88430 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccl22O88430 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl22O88430 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl22O88430 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl22O88430 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl22O88430 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl22O88430 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl22O88430 Nkain2-201ENSMUST00000092602 558 ntBASIC21.03■□□□□ 0.96
Ccl22O88430 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl22O88430 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccl22O88430 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms