Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tgfbr3O88393 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Tgfbr3O88393 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tgfbr3O88393 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tgfbr3O88393 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tgfbr3O88393 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tgfbr3O88393 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Tgfbr3O88393 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tgfbr3O88393 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tgfbr3O88393 Particl-201ENSMUST00000205370 1560 ntBASIC23.13■■□□□ 1.29
Tgfbr3O88393 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.12■■□□□ 1.29
Tgfbr3O88393 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Tgfbr3O88393 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tgfbr3O88393 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.11■■□□□ 1.29
Tgfbr3O88393 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.11■■□□□ 1.29
Tgfbr3O88393 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tgfbr3O88393 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tgfbr3O88393 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tgfbr3O88393 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.09■■□□□ 1.29
Tgfbr3O88393 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Tgfbr3O88393 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.08■■□□□ 1.29
Tgfbr3O88393 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tgfbr3O88393 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tgfbr3O88393 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Tgfbr3O88393 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tgfbr3O88393 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tgfbr3O88393 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tgfbr3O88393 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tgfbr3O88393 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tgfbr3O88393 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tgfbr3O88393 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tgfbr3O88393 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.05■■□□□ 1.28
Tgfbr3O88393 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Tgfbr3O88393 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.05■■□□□ 1.28
Tgfbr3O88393 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Tgfbr3O88393 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.03■■□□□ 1.28
Tgfbr3O88393 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tgfbr3O88393 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tgfbr3O88393 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tgfbr3O88393 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.01■■□□□ 1.27
Tgfbr3O88393 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tgfbr3O88393 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tgfbr3O88393 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tgfbr3O88393 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tgfbr3O88393 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23■■□□□ 1.27
Tgfbr3O88393 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Tgfbr3O88393 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tgfbr3O88393 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Tgfbr3O88393 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.96■■□□□ 1.27
Tgfbr3O88393 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tgfbr3O88393 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tgfbr3O88393 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tgfbr3O88393 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Tgfbr3O88393 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tgfbr3O88393 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.94■■□□□ 1.26
Tgfbr3O88393 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tgfbr3O88393 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tgfbr3O88393 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Tgfbr3O88393 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.93■■□□□ 1.26
Tgfbr3O88393 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tgfbr3O88393 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tgfbr3O88393 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tgfbr3O88393 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.91■■□□□ 1.26
Tgfbr3O88393 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tgfbr3O88393 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tgfbr3O88393 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tgfbr3O88393 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Tgfbr3O88393 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tgfbr3O88393 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tgfbr3O88393 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tgfbr3O88393 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.89■■□□□ 1.25
Tgfbr3O88393 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tgfbr3O88393 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tgfbr3O88393 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tgfbr3O88393 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Tgfbr3O88393 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tgfbr3O88393 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.87■■□□□ 1.25
Tgfbr3O88393 Scarna2-201ENSMUST00000157560 414 ntBASIC22.87■■□□□ 1.25
Tgfbr3O88393 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.87■■□□□ 1.25
Tgfbr3O88393 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Tgfbr3O88393 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tgfbr3O88393 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tgfbr3O88393 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.86■■□□□ 1.25
Tgfbr3O88393 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tgfbr3O88393 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tgfbr3O88393 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tgfbr3O88393 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.85■■□□□ 1.25
Tgfbr3O88393 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Tgfbr3O88393 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Tgfbr3O88393 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tgfbr3O88393 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tgfbr3O88393 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Tgfbr3O88393 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Tgfbr3O88393 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Tgfbr3O88393 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.82■■□□□ 1.24
Tgfbr3O88393 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Tgfbr3O88393 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tgfbr3O88393 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tgfbr3O88393 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tgfbr3O88393 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms