Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.66■■■□□ 2.34
Mmp8O70138 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Mmp8O70138 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Mmp8O70138 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Mmp8O70138 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Mmp8O70138 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.64■■■□□ 2.34
Mmp8O70138 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Mmp8O70138 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Mmp8O70138 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Mmp8O70138 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
Mmp8O70138 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Mmp8O70138 Gm30023-201ENSMUST00000197970 889 ntBASIC29.61■■■□□ 2.33
Mmp8O70138 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Mmp8O70138 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.6■■■□□ 2.33
Mmp8O70138 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
Mmp8O70138 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.59■■■□□ 2.33
Mmp8O70138 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.58■■■□□ 2.33
Mmp8O70138 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Mmp8O70138 Nkain2-201ENSMUST00000092602 558 ntBASIC29.58■■■□□ 2.33
Mmp8O70138 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Mmp8O70138 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Mmp8O70138 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Mmp8O70138 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Mmp8O70138 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.54■■■□□ 2.32
Mmp8O70138 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Mmp8O70138 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.52■■■□□ 2.32
Mmp8O70138 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Mmp8O70138 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
Mmp8O70138 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Mmp8O70138 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
Mmp8O70138 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Mmp8O70138 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Mmp8O70138 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Mmp8O70138 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
Mmp8O70138 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC29.48■■■□□ 2.31
Mmp8O70138 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Mmp8O70138 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Mmp8O70138 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Mmp8O70138 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Mmp8O70138 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Mmp8O70138 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Mmp8O70138 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Mmp8O70138 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Mmp8O70138 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Mmp8O70138 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Mmp8O70138 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Mmp8O70138 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
Mmp8O70138 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
Mmp8O70138 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Mmp8O70138 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Mmp8O70138 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Mmp8O70138 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.43■■■□□ 2.3
Mmp8O70138 Gm6821-201ENSMUST00000107540 542 ntBASIC29.43■■■□□ 2.3
Mmp8O70138 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.43■■■□□ 2.3
Mmp8O70138 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Mmp8O70138 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Mmp8O70138 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.42■■■□□ 2.3
Mmp8O70138 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Mmp8O70138 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Mmp8O70138 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Mmp8O70138 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Mmp8O70138 Gm8503-201ENSMUST00000118131 455 ntBASIC29.4■■■□□ 2.3
Mmp8O70138 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Mmp8O70138 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.39■■■□□ 2.3
Mmp8O70138 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Mmp8O70138 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Mmp8O70138 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Mmp8O70138 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.36■■■□□ 2.29
Mmp8O70138 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Mmp8O70138 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.36■■■□□ 2.29
Mmp8O70138 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Mmp8O70138 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Mmp8O70138 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Mmp8O70138 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.34■■■□□ 2.29
Mmp8O70138 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Mmp8O70138 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Mmp8O70138 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Mmp8O70138 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.32■■■□□ 2.28
Mmp8O70138 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Mmp8O70138 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.32■■■□□ 2.28
Mmp8O70138 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.3■■■□□ 2.28
Mmp8O70138 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Mmp8O70138 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Mmp8O70138 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Mmp8O70138 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.27■■■□□ 2.28
Mmp8O70138 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Mmp8O70138 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Mmp8O70138 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Mmp8O70138 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Mmp8O70138 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.25■■■□□ 2.27
Mmp8O70138 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.24■■■□□ 2.27
Mmp8O70138 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Mmp8O70138 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Mmp8O70138 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.22■■■□□ 2.27
Mmp8O70138 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Mmp8O70138 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Mmp8O70138 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Mmp8O70138 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Mmp8O70138 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Mmp8O70138 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.19■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms