Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh12O55134 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.57■■□□□ 1.04
Pcdh12O55134 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Pcdh12O55134 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh12O55134 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh12O55134 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh12O55134 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Pcdh12O55134 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh12O55134 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh12O55134 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh12O55134 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdh12O55134 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdh12O55134 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdh12O55134 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.54■■□□□ 1.04
Pcdh12O55134 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh12O55134 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh12O55134 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh12O55134 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh12O55134 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdh12O55134 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh12O55134 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh12O55134 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh12O55134 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Pcdh12O55134 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh12O55134 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh12O55134 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdh12O55134 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdh12O55134 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh12O55134 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh12O55134 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh12O55134 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh12O55134 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh12O55134 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh12O55134 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh12O55134 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh12O55134 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh12O55134 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh12O55134 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh12O55134 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh12O55134 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdh12O55134 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh12O55134 Gm6821-201ENSMUST00000107540 542 ntBASIC21.45■■□□□ 1.02
Pcdh12O55134 Gm8503-201ENSMUST00000118131 455 ntBASIC21.45■■□□□ 1.02
Pcdh12O55134 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.45■■□□□ 1.02
Pcdh12O55134 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh12O55134 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh12O55134 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh12O55134 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh12O55134 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh12O55134 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh12O55134 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdh12O55134 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdh12O55134 Nkain2-201ENSMUST00000092602 558 ntBASIC21.43■■□□□ 1.02
Pcdh12O55134 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh12O55134 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Pcdh12O55134 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Pcdh12O55134 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh12O55134 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh12O55134 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdh12O55134 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh12O55134 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh12O55134 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcdh12O55134 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh12O55134 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh12O55134 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh12O55134 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh12O55134 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh12O55134 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh12O55134 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh12O55134 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdh12O55134 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh12O55134 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh12O55134 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh12O55134 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh12O55134 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh12O55134 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh12O55134 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh12O55134 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh12O55134 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh12O55134 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pcdh12O55134 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.35■■□□□ 1.01
Pcdh12O55134 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh12O55134 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh12O55134 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh12O55134 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh12O55134 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.33■■□□□ 1.01
Pcdh12O55134 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh12O55134 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdh12O55134 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.32■■□□□ 1
Pcdh12O55134 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh12O55134 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdh12O55134 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh12O55134 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh12O55134 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Pcdh12O55134 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh12O55134 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Pcdh12O55134 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh12O55134 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh12O55134 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh12O55134 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms