Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Cntnap1O54991 Gm16437-201ENSMUST00000025669 507 ntBASIC32.86■■■□□ 2.85
Cntnap1O54991 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cntnap1O54991 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cntnap1O54991 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
Cntnap1O54991 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.83■■■□□ 2.85
Cntnap1O54991 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
Cntnap1O54991 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cntnap1O54991 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cntnap1O54991 Particl-201ENSMUST00000205370 1560 ntBASIC32.79■■■□□ 2.84
Cntnap1O54991 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cntnap1O54991 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cntnap1O54991 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cntnap1O54991 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC32.78■■■□□ 2.84
Cntnap1O54991 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC32.78■■■□□ 2.84
Cntnap1O54991 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cntnap1O54991 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cntnap1O54991 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Cntnap1O54991 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC32.77■■■□□ 2.84
Cntnap1O54991 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cntnap1O54991 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Cntnap1O54991 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Cntnap1O54991 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.75■■■□□ 2.83
Cntnap1O54991 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Cntnap1O54991 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
Cntnap1O54991 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC32.7■■■□□ 2.82
Cntnap1O54991 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Cntnap1O54991 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Cntnap1O54991 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cntnap1O54991 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cntnap1O54991 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cntnap1O54991 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cntnap1O54991 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cntnap1O54991 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cntnap1O54991 Pkd1-207ENSMUST00000228550 1050 ntBASIC32.64■■■□□ 2.82
Cntnap1O54991 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Cntnap1O54991 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC32.64■■■□□ 2.82
Cntnap1O54991 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC32.64■■■□□ 2.82
Cntnap1O54991 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Cntnap1O54991 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cntnap1O54991 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cntnap1O54991 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC32.62■■■□□ 2.81
Cntnap1O54991 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cntnap1O54991 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cntnap1O54991 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
Cntnap1O54991 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Cntnap1O54991 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC32.56■■■□□ 2.8
Cntnap1O54991 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cntnap1O54991 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cntnap1O54991 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cntnap1O54991 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Cntnap1O54991 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cntnap1O54991 Gm14523-201ENSMUST00000117260 558 ntBASIC32.55■■■□□ 2.8
Cntnap1O54991 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cntnap1O54991 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cntnap1O54991 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC32.54■■■□□ 2.8
Cntnap1O54991 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cntnap1O54991 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Cntnap1O54991 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC32.5■■■□□ 2.79
Cntnap1O54991 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Cntnap1O54991 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Cntnap1O54991 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Cntnap1O54991 AC154454.1-201ENSMUST00000225253 216 ntBASIC32.48■■■□□ 2.79
Cntnap1O54991 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Cntnap1O54991 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.47■■■□□ 2.79
Cntnap1O54991 Gm15546-201ENSMUST00000122095 826 ntBASIC32.46■■■□□ 2.79
Cntnap1O54991 Gm5067-201ENSMUST00000170449 1009 ntBASIC32.45■■■□□ 2.79
Cntnap1O54991 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
Cntnap1O54991 Gm5921-201ENSMUST00000075898 882 ntBASIC32.44■■■□□ 2.78
Cntnap1O54991 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Cntnap1O54991 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Cntnap1O54991 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Cntnap1O54991 Gm45364-201ENSMUST00000210883 159 ntBASIC32.41■■■□□ 2.78
Cntnap1O54991 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC32.41■■■□□ 2.78
Cntnap1O54991 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Cntnap1O54991 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Cntnap1O54991 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Cntnap1O54991 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Cntnap1O54991 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Cntnap1O54991 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Cntnap1O54991 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC32.39■■■□□ 2.78
Cntnap1O54991 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Cntnap1O54991 Gm30023-201ENSMUST00000197970 889 ntBASIC32.38■■■□□ 2.77
Cntnap1O54991 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Cntnap1O54991 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Cntnap1O54991 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Cntnap1O54991 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Cntnap1O54991 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Cntnap1O54991 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Cntnap1O54991 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Cntnap1O54991 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Cntnap1O54991 Mir3960-201ENSMUST00000198213 73 ntBASIC32.33■■■□□ 2.77
Cntnap1O54991 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.77
Cntnap1O54991 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Cntnap1O54991 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Cntnap1O54991 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Cntnap1O54991 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC32.31■■■□□ 2.76
Cntnap1O54991 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC32.3■■■□□ 2.76
Cntnap1O54991 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Cntnap1O54991 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC32.29■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms