Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Slc1a4O35874 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Slc1a4O35874 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Slc1a4O35874 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.26■■■□□ 2.11
Slc1a4O35874 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Slc1a4O35874 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Slc1a4O35874 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.24■■■□□ 2.11
Slc1a4O35874 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Slc1a4O35874 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc1a4O35874 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc1a4O35874 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Slc1a4O35874 Gm30023-201ENSMUST00000197970 889 ntBASIC28.22■■■□□ 2.11
Slc1a4O35874 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Slc1a4O35874 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Slc1a4O35874 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Slc1a4O35874 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Slc1a4O35874 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Slc1a4O35874 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.17■■■□□ 2.1
Slc1a4O35874 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slc1a4O35874 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Slc1a4O35874 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Slc1a4O35874 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Slc1a4O35874 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slc1a4O35874 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Slc1a4O35874 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Slc1a4O35874 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.15■■■□□ 2.1
Slc1a4O35874 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Slc1a4O35874 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
Slc1a4O35874 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.14■■■□□ 2.1
Slc1a4O35874 Amer2-203ENSMUST00000225247 2662 ntBASIC28.14■■■□□ 2.1
Slc1a4O35874 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.14■■■□□ 2.1
Slc1a4O35874 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.14■■■□□ 2.1
Slc1a4O35874 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Slc1a4O35874 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Slc1a4O35874 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Slc1a4O35874 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc1a4O35874 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Slc1a4O35874 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc1a4O35874 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc1a4O35874 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc1a4O35874 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc1a4O35874 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.11■■■□□ 2.09
Slc1a4O35874 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc1a4O35874 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Slc1a4O35874 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.1■■■□□ 2.09
Slc1a4O35874 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Slc1a4O35874 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Slc1a4O35874 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Slc1a4O35874 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Slc1a4O35874 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Slc1a4O35874 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
Slc1a4O35874 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Slc1a4O35874 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Slc1a4O35874 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.04■■■□□ 2.08
Slc1a4O35874 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Slc1a4O35874 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Slc1a4O35874 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Slc1a4O35874 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.03■■■□□ 2.08
Slc1a4O35874 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc1a4O35874 Gm7432-201ENSMUST00000210343 879 ntBASIC28.02■■■□□ 2.08
Slc1a4O35874 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Slc1a4O35874 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Slc1a4O35874 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28■■■□□ 2.07
Slc1a4O35874 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Slc1a4O35874 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Slc1a4O35874 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
Slc1a4O35874 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Slc1a4O35874 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Slc1a4O35874 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Slc1a4O35874 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Slc1a4O35874 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Slc1a4O35874 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Slc1a4O35874 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.95■■■□□ 2.06
Slc1a4O35874 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Slc1a4O35874 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Slc1a4O35874 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Slc1a4O35874 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Slc1a4O35874 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Slc1a4O35874 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Slc1a4O35874 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.94■■■□□ 2.06
Slc1a4O35874 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Slc1a4O35874 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.93■■■□□ 2.06
Slc1a4O35874 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Slc1a4O35874 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.92■■■□□ 2.06
Slc1a4O35874 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Slc1a4O35874 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.91■■■□□ 2.06
Slc1a4O35874 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.91■■■□□ 2.06
Slc1a4O35874 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
Slc1a4O35874 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.88■■■□□ 2.05
Slc1a4O35874 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.88■■■□□ 2.05
Slc1a4O35874 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Slc1a4O35874 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Slc1a4O35874 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Slc1a4O35874 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.87■■■□□ 2.05
Slc1a4O35874 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Slc1a4O35874 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Slc1a4O35874 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Slc1a4O35874 Gm11599-201ENSMUST00000118720 878 ntBASIC27.86■■■□□ 2.05
Slc1a4O35874 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Slc1a4O35874 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms