Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm20708H3BKF4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm20708H3BKF4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm20708H3BKF4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm20708H3BKF4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm20708H3BKF4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm20708H3BKF4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm20708H3BKF4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm20708H3BKF4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Gm20708H3BKF4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm20708H3BKF4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.29■□□□□ 0.84
Gm20708H3BKF4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm20708H3BKF4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm20708H3BKF4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm20708H3BKF4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm20708H3BKF4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm20708H3BKF4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm20708H3BKF4 Gm30023-201ENSMUST00000197970 889 ntBASIC20.26■□□□□ 0.83
Gm20708H3BKF4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm20708H3BKF4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm20708H3BKF4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.25■□□□□ 0.83
Gm20708H3BKF4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm20708H3BKF4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm20708H3BKF4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm20708H3BKF4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gm20708H3BKF4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm20708H3BKF4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm20708H3BKF4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm20708H3BKF4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm20708H3BKF4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm20708H3BKF4 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.22■□□□□ 0.83
Gm20708H3BKF4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm20708H3BKF4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm20708H3BKF4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gm20708H3BKF4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm20708H3BKF4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm20708H3BKF4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gm20708H3BKF4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm20708H3BKF4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Gm20708H3BKF4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Gm20708H3BKF4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm20708H3BKF4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm20708H3BKF4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm20708H3BKF4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm20708H3BKF4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm20708H3BKF4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Gm20708H3BKF4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm20708H3BKF4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm20708H3BKF4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm20708H3BKF4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Gm20708H3BKF4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm20708H3BKF4 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.16■□□□□ 0.82
Gm20708H3BKF4 Nkain2-201ENSMUST00000092602 558 ntBASIC20.16■□□□□ 0.82
Gm20708H3BKF4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm20708H3BKF4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm20708H3BKF4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm20708H3BKF4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Gm20708H3BKF4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm20708H3BKF4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm20708H3BKF4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm20708H3BKF4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Gm20708H3BKF4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.14■□□□□ 0.81
Gm20708H3BKF4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm20708H3BKF4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm20708H3BKF4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm20708H3BKF4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm20708H3BKF4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm20708H3BKF4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.13■□□□□ 0.81
Gm20708H3BKF4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm20708H3BKF4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm20708H3BKF4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm20708H3BKF4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm20708H3BKF4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm20708H3BKF4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm20708H3BKF4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm20708H3BKF4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm20708H3BKF4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm20708H3BKF4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm20708H3BKF4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm20708H3BKF4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm20708H3BKF4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm20708H3BKF4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm20708H3BKF4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm20708H3BKF4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm20708H3BKF4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm20708H3BKF4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm20708H3BKF4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.04■□□□□ 0.8
Gm20708H3BKF4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm20708H3BKF4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm20708H3BKF4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20708H3BKF4 Gm6821-201ENSMUST00000107540 542 ntBASIC20.03■□□□□ 0.8
Gm20708H3BKF4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm20708H3BKF4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20708H3BKF4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20708H3BKF4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm20708H3BKF4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20708H3BKF4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm20708H3BKF4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm20708H3BKF4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm20708H3BKF4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms