Protein–RNA interactions for Protein: F2Z474

Gm12169, Predicted gene 12169, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12169F2Z474 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12169F2Z474 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Gm12169F2Z474 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12169F2Z474 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm12169F2Z474 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm12169F2Z474 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12169F2Z474 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12169F2Z474 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12169F2Z474 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12169F2Z474 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12169F2Z474 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm12169F2Z474 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12169F2Z474 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12169F2Z474 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm12169F2Z474 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12169F2Z474 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12169F2Z474 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12169F2Z474 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.17■□□□□ 0.5
Gm12169F2Z474 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12169F2Z474 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12169F2Z474 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12169F2Z474 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12169F2Z474 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12169F2Z474 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12169F2Z474 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12169F2Z474 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm12169F2Z474 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12169F2Z474 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12169F2Z474 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12169F2Z474 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm12169F2Z474 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gm12169F2Z474 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12169F2Z474 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12169F2Z474 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm12169F2Z474 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12169F2Z474 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12169F2Z474 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm12169F2Z474 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12169F2Z474 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12169F2Z474 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12169F2Z474 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm12169F2Z474 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12169F2Z474 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12169F2Z474 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12169F2Z474 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm12169F2Z474 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12169F2Z474 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12169F2Z474 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12169F2Z474 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12169F2Z474 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12169F2Z474 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12169F2Z474 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.06■□□□□ 0.48
Gm12169F2Z474 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12169F2Z474 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12169F2Z474 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm12169F2Z474 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm12169F2Z474 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm12169F2Z474 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm12169F2Z474 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm12169F2Z474 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12169F2Z474 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Gm12169F2Z474 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm12169F2Z474 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Gm12169F2Z474 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12169F2Z474 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12169F2Z474 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm12169F2Z474 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm12169F2Z474 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm12169F2Z474 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Gm12169F2Z474 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Gm12169F2Z474 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12169F2Z474 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12169F2Z474 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Gm12169F2Z474 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12169F2Z474 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm12169F2Z474 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12169F2Z474 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12169F2Z474 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm12169F2Z474 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.99■□□□□ 0.47
Gm12169F2Z474 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm12169F2Z474 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms