Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc25a53A2AF28 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc25a53A2AF28 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Slc25a53A2AF28 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Slc25a53A2AF28 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc25a53A2AF28 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.51■■□□□ 1.03
Slc25a53A2AF28 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Slc25a53A2AF28 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.5■■□□□ 1.03
Slc25a53A2AF28 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.5■■□□□ 1.03
Slc25a53A2AF28 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.5■■□□□ 1.03
Slc25a53A2AF28 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc25a53A2AF28 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc25a53A2AF28 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.49■■□□□ 1.03
Slc25a53A2AF28 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc25a53A2AF28 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Slc25a53A2AF28 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc25a53A2AF28 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.47■■□□□ 1.03
Slc25a53A2AF28 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc25a53A2AF28 Gm11599-201ENSMUST00000118720 878 ntBASIC21.45■■□□□ 1.02
Slc25a53A2AF28 Gm30023-201ENSMUST00000197970 889 ntBASIC21.44■■□□□ 1.02
Slc25a53A2AF28 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc25a53A2AF28 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc25a53A2AF28 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Slc25a53A2AF28 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc25a53A2AF28 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.43■■□□□ 1.02
Slc25a53A2AF28 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Slc25a53A2AF28 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc25a53A2AF28 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc25a53A2AF28 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
Slc25a53A2AF28 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc25a53A2AF28 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc25a53A2AF28 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc25a53A2AF28 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc25a53A2AF28 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc25a53A2AF28 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc25a53A2AF28 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc25a53A2AF28 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc25a53A2AF28 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc25a53A2AF28 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Slc25a53A2AF28 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc25a53A2AF28 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc25a53A2AF28 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.39■■□□□ 1.01
Slc25a53A2AF28 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Slc25a53A2AF28 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc25a53A2AF28 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc25a53A2AF28 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc25a53A2AF28 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc25a53A2AF28 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.37■■□□□ 1.01
Slc25a53A2AF28 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc25a53A2AF28 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc25a53A2AF28 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.36■■□□□ 1.01
Slc25a53A2AF28 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc25a53A2AF28 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc25a53A2AF28 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc25a53A2AF28 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc25a53A2AF28 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc25a53A2AF28 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.35■■□□□ 1.01
Slc25a53A2AF28 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc25a53A2AF28 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc25a53A2AF28 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc25a53A2AF28 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.31■■□□□ 1
Slc25a53A2AF28 Particl-201ENSMUST00000205370 1560 ntBASIC21.3■■□□□ 1
Slc25a53A2AF28 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc25a53A2AF28 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc25a53A2AF28 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc25a53A2AF28 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc25a53A2AF28 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc25a53A2AF28 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc25a53A2AF28 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Slc25a53A2AF28 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
Slc25a53A2AF28 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc25a53A2AF28 Amer2-203ENSMUST00000225247 2662 ntBASIC21.26■□□□□ 0.99
Slc25a53A2AF28 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc25a53A2AF28 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc25a53A2AF28 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Slc25a53A2AF28 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc25a53A2AF28 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc25a53A2AF28 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Slc25a53A2AF28 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc25a53A2AF28 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc25a53A2AF28 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc25a53A2AF28 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.21■□□□□ 0.99
Slc25a53A2AF28 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc25a53A2AF28 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc25a53A2AF28 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc25a53A2AF28 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc25a53A2AF28 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc25a53A2AF28 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc25a53A2AF28 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc25a53A2AF28 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc25a53A2AF28 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.18■□□□□ 0.98
Slc25a53A2AF28 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc25a53A2AF28 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc25a53A2AF28 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc25a53A2AF28 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc25a53A2AF28 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Slc25a53A2AF28 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc25a53A2AF28 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.16■□□□□ 0.98
Slc25a53A2AF28 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.16■□□□□ 0.98
Slc25a53A2AF28 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms