Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lnp1A0A1B0GSK3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lnp1A0A1B0GSK3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lnp1A0A1B0GSK3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lnp1A0A1B0GSK3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lnp1A0A1B0GSK3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lnp1A0A1B0GSK3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lnp1A0A1B0GSK3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lnp1A0A1B0GSK3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lnp1A0A1B0GSK3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lnp1A0A1B0GSK3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lnp1A0A1B0GSK3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lnp1A0A1B0GSK3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lnp1A0A1B0GSK3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lnp1A0A1B0GSK3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lnp1A0A1B0GSK3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lnp1A0A1B0GSK3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lnp1A0A1B0GSK3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lnp1A0A1B0GSK3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lnp1A0A1B0GSK3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lnp1A0A1B0GSK3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Lnp1A0A1B0GSK3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lnp1A0A1B0GSK3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lnp1A0A1B0GSK3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lnp1A0A1B0GSK3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lnp1A0A1B0GSK3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lnp1A0A1B0GSK3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.77■□□□□ 0.76
Lnp1A0A1B0GSK3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Lnp1A0A1B0GSK3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lnp1A0A1B0GSK3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lnp1A0A1B0GSK3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.74■□□□□ 0.75
Lnp1A0A1B0GSK3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lnp1A0A1B0GSK3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lnp1A0A1B0GSK3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lnp1A0A1B0GSK3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lnp1A0A1B0GSK3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lnp1A0A1B0GSK3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lnp1A0A1B0GSK3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lnp1A0A1B0GSK3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lnp1A0A1B0GSK3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lnp1A0A1B0GSK3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lnp1A0A1B0GSK3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lnp1A0A1B0GSK3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.72■□□□□ 0.75
Lnp1A0A1B0GSK3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lnp1A0A1B0GSK3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lnp1A0A1B0GSK3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lnp1A0A1B0GSK3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lnp1A0A1B0GSK3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Lnp1A0A1B0GSK3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lnp1A0A1B0GSK3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.7■□□□□ 0.74
Lnp1A0A1B0GSK3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lnp1A0A1B0GSK3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lnp1A0A1B0GSK3 Gm30023-201ENSMUST00000197970 889 ntBASIC19.69■□□□□ 0.74
Lnp1A0A1B0GSK3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lnp1A0A1B0GSK3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lnp1A0A1B0GSK3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lnp1A0A1B0GSK3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lnp1A0A1B0GSK3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lnp1A0A1B0GSK3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lnp1A0A1B0GSK3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lnp1A0A1B0GSK3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lnp1A0A1B0GSK3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.67■□□□□ 0.74
Lnp1A0A1B0GSK3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.67■□□□□ 0.74
Lnp1A0A1B0GSK3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lnp1A0A1B0GSK3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lnp1A0A1B0GSK3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lnp1A0A1B0GSK3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Lnp1A0A1B0GSK3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Lnp1A0A1B0GSK3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lnp1A0A1B0GSK3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lnp1A0A1B0GSK3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lnp1A0A1B0GSK3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.65■□□□□ 0.74
Lnp1A0A1B0GSK3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Lnp1A0A1B0GSK3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lnp1A0A1B0GSK3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lnp1A0A1B0GSK3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lnp1A0A1B0GSK3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.62■□□□□ 0.73
Lnp1A0A1B0GSK3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Lnp1A0A1B0GSK3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lnp1A0A1B0GSK3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lnp1A0A1B0GSK3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lnp1A0A1B0GSK3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lnp1A0A1B0GSK3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lnp1A0A1B0GSK3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lnp1A0A1B0GSK3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lnp1A0A1B0GSK3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lnp1A0A1B0GSK3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lnp1A0A1B0GSK3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 168.6 ms