Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav9d-4A0A0G2JG37 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav9d-4A0A0G2JG37 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trav9d-4A0A0G2JG37 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav9d-4A0A0G2JG37 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav9d-4A0A0G2JG37 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-4A0A0G2JG37 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-4A0A0G2JG37 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav9d-4A0A0G2JG37 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-4A0A0G2JG37 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-4A0A0G2JG37 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-4A0A0G2JG37 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-4A0A0G2JG37 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav9d-4A0A0G2JG37 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav9d-4A0A0G2JG37 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Trav9d-4A0A0G2JG37 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-4A0A0G2JG37 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav9d-4A0A0G2JG37 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav9d-4A0A0G2JG37 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav9d-4A0A0G2JG37 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-4A0A0G2JG37 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-4A0A0G2JG37 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav9d-4A0A0G2JG37 Gm26115-201ENSMUST00000175605 87 ntBASIC16.19■□□□□ 0.18
Trav9d-4A0A0G2JG37 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav9d-4A0A0G2JG37 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-4A0A0G2JG37 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav9d-4A0A0G2JG37 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-4A0A0G2JG37 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-4A0A0G2JG37 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-4A0A0G2JG37 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trav9d-4A0A0G2JG37 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-4A0A0G2JG37 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav9d-4A0A0G2JG37 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-4A0A0G2JG37 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-4A0A0G2JG37 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-4A0A0G2JG37 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Trav9d-4A0A0G2JG37 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav9d-4A0A0G2JG37 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-4A0A0G2JG37 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
Trav9d-4A0A0G2JG37 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav9d-4A0A0G2JG37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-4A0A0G2JG37 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
Trav9d-4A0A0G2JG37 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-4A0A0G2JG37 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-4A0A0G2JG37 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-4A0A0G2JG37 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav9d-4A0A0G2JG37 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav9d-4A0A0G2JG37 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-4A0A0G2JG37 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-4A0A0G2JG37 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-4A0A0G2JG37 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav9d-4A0A0G2JG37 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav9d-4A0A0G2JG37 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-4A0A0G2JG37 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-4A0A0G2JG37 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-4A0A0G2JG37 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-4A0A0G2JG37 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-4A0A0G2JG37 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-4A0A0G2JG37 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Trav9d-4A0A0G2JG37 Gm8109-201ENSMUST00000194076 746 ntBASIC16.09■□□□□ 0.17
Trav9d-4A0A0G2JG37 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-4A0A0G2JG37 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9d-4A0A0G2JG37 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9d-4A0A0G2JG37 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-4A0A0G2JG37 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-4A0A0G2JG37 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav9d-4A0A0G2JG37 Peli2-204ENSMUST00000226513 1320 ntBASIC16.07■□□□□ 0.16
Trav9d-4A0A0G2JG37 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-4A0A0G2JG37 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-4A0A0G2JG37 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-4A0A0G2JG37 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.06■□□□□ 0.16
Trav9d-4A0A0G2JG37 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.06■□□□□ 0.16
Trav9d-4A0A0G2JG37 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav9d-4A0A0G2JG37 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-4A0A0G2JG37 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-4A0A0G2JG37 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-4A0A0G2JG37 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-4A0A0G2JG37 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-4A0A0G2JG37 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-4A0A0G2JG37 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-4A0A0G2JG37 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-4A0A0G2JG37 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms