Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav23A0A0G2JG17 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav23A0A0G2JG17 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav23A0A0G2JG17 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Trav23A0A0G2JG17 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav23A0A0G2JG17 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Trav23A0A0G2JG17 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.36■□□□□ 0.69
Trav23A0A0G2JG17 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.35■□□□□ 0.69
Trav23A0A0G2JG17 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav23A0A0G2JG17 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav23A0A0G2JG17 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav23A0A0G2JG17 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav23A0A0G2JG17 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav23A0A0G2JG17 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trav23A0A0G2JG17 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav23A0A0G2JG17 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav23A0A0G2JG17 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trav23A0A0G2JG17 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav23A0A0G2JG17 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav23A0A0G2JG17 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav23A0A0G2JG17 Nkain2-201ENSMUST00000092602 558 ntBASIC19.31■□□□□ 0.68
Trav23A0A0G2JG17 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav23A0A0G2JG17 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav23A0A0G2JG17 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav23A0A0G2JG17 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trav23A0A0G2JG17 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.29■□□□□ 0.68
Trav23A0A0G2JG17 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav23A0A0G2JG17 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.28■□□□□ 0.68
Trav23A0A0G2JG17 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trav23A0A0G2JG17 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav23A0A0G2JG17 Gm8503-201ENSMUST00000118131 455 ntBASIC19.27■□□□□ 0.68
Trav23A0A0G2JG17 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav23A0A0G2JG17 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Trav23A0A0G2JG17 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav23A0A0G2JG17 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav23A0A0G2JG17 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav23A0A0G2JG17 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav23A0A0G2JG17 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav23A0A0G2JG17 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav23A0A0G2JG17 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav23A0A0G2JG17 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trav23A0A0G2JG17 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav23A0A0G2JG17 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav23A0A0G2JG17 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav23A0A0G2JG17 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav23A0A0G2JG17 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav23A0A0G2JG17 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav23A0A0G2JG17 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav23A0A0G2JG17 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav23A0A0G2JG17 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav23A0A0G2JG17 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.21■□□□□ 0.67
Trav23A0A0G2JG17 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav23A0A0G2JG17 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Trav23A0A0G2JG17 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav23A0A0G2JG17 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav23A0A0G2JG17 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Trav23A0A0G2JG17 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav23A0A0G2JG17 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav23A0A0G2JG17 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.19■□□□□ 0.66
Trav23A0A0G2JG17 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav23A0A0G2JG17 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.18■□□□□ 0.66
Trav23A0A0G2JG17 Amer2-203ENSMUST00000225247 2662 ntBASIC19.18■□□□□ 0.66
Trav23A0A0G2JG17 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav23A0A0G2JG17 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav23A0A0G2JG17 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav23A0A0G2JG17 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav23A0A0G2JG17 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav23A0A0G2JG17 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Trav23A0A0G2JG17 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav23A0A0G2JG17 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.14■□□□□ 0.66
Trav23A0A0G2JG17 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav23A0A0G2JG17 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav23A0A0G2JG17 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav23A0A0G2JG17 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav23A0A0G2JG17 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav23A0A0G2JG17 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav23A0A0G2JG17 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav23A0A0G2JG17 Gm30023-201ENSMUST00000197970 889 ntBASIC19.11■□□□□ 0.65
Trav23A0A0G2JG17 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms