Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav7-5A0A0G2JFX6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-5A0A0G2JFX6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7-5A0A0G2JFX6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7-5A0A0G2JFX6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.68■□□□□ 0.58
Trav7-5A0A0G2JFX6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7-5A0A0G2JFX6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-5A0A0G2JFX6 Amer2-203ENSMUST00000225247 2662 ntBASIC18.67■□□□□ 0.58
Trav7-5A0A0G2JFX6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Nkain2-201ENSMUST00000092602 558 ntBASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-5A0A0G2JFX6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav7-5A0A0G2JFX6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trav7-5A0A0G2JFX6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7-5A0A0G2JFX6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-5A0A0G2JFX6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-5A0A0G2JFX6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-5A0A0G2JFX6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-5A0A0G2JFX6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav7-5A0A0G2JFX6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7-5A0A0G2JFX6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7-5A0A0G2JFX6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7-5A0A0G2JFX6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav7-5A0A0G2JFX6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.62■□□□□ 0.57
Trav7-5A0A0G2JFX6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7-5A0A0G2JFX6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav7-5A0A0G2JFX6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-5A0A0G2JFX6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav7-5A0A0G2JFX6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7-5A0A0G2JFX6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.6■□□□□ 0.57
Trav7-5A0A0G2JFX6 Gm6821-201ENSMUST00000107540 542 ntBASIC18.59■□□□□ 0.57
Trav7-5A0A0G2JFX6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-5A0A0G2JFX6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-5A0A0G2JFX6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7-5A0A0G2JFX6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav7-5A0A0G2JFX6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.57■□□□□ 0.56
Trav7-5A0A0G2JFX6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7-5A0A0G2JFX6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Trav7-5A0A0G2JFX6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7-5A0A0G2JFX6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav7-5A0A0G2JFX6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7-5A0A0G2JFX6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.55■□□□□ 0.56
Trav7-5A0A0G2JFX6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-5A0A0G2JFX6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.54■□□□□ 0.56
Trav7-5A0A0G2JFX6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Trav7-5A0A0G2JFX6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-5A0A0G2JFX6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7-5A0A0G2JFX6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav7-5A0A0G2JFX6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7-5A0A0G2JFX6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7-5A0A0G2JFX6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Trav7-5A0A0G2JFX6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7-5A0A0G2JFX6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7-5A0A0G2JFX6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-5A0A0G2JFX6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-5A0A0G2JFX6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-5A0A0G2JFX6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trav7-5A0A0G2JFX6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-5A0A0G2JFX6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-5A0A0G2JFX6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-5A0A0G2JFX6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav7-5A0A0G2JFX6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-5A0A0G2JFX6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-5A0A0G2JFX6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.49■□□□□ 0.55
Trav7-5A0A0G2JFX6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-5A0A0G2JFX6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-5A0A0G2JFX6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav7-5A0A0G2JFX6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-5A0A0G2JFX6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-5A0A0G2JFX6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-5A0A0G2JFX6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7-5A0A0G2JFX6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav7-5A0A0G2JFX6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7-5A0A0G2JFX6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav7-5A0A0G2JFX6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-5A0A0G2JFX6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-5A0A0G2JFX6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav7-5A0A0G2JFX6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-5A0A0G2JFX6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trav7-5A0A0G2JFX6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-5A0A0G2JFX6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.44■□□□□ 0.54
Trav7-5A0A0G2JFX6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-5A0A0G2JFX6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav7-5A0A0G2JFX6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-5A0A0G2JFX6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.43■□□□□ 0.54
Trav7-5A0A0G2JFX6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.43■□□□□ 0.54
Trav7-5A0A0G2JFX6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Trav7-5A0A0G2JFX6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Trav7-5A0A0G2JFX6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms