Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7-1A0A0G2JEV5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7-1A0A0G2JEV5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav7-1A0A0G2JEV5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trav7-1A0A0G2JEV5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-1A0A0G2JEV5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-1A0A0G2JEV5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav7-1A0A0G2JEV5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav7-1A0A0G2JEV5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav7-1A0A0G2JEV5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-1A0A0G2JEV5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-1A0A0G2JEV5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-1A0A0G2JEV5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-1A0A0G2JEV5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Trav7-1A0A0G2JEV5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav7-1A0A0G2JEV5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-1A0A0G2JEV5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-1A0A0G2JEV5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-1A0A0G2JEV5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-1A0A0G2JEV5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-1A0A0G2JEV5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-1A0A0G2JEV5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-1A0A0G2JEV5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-1A0A0G2JEV5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-1A0A0G2JEV5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trav7-1A0A0G2JEV5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-1A0A0G2JEV5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav7-1A0A0G2JEV5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7-1A0A0G2JEV5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.23■□□□□ 0.51
Trav7-1A0A0G2JEV5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-1A0A0G2JEV5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-1A0A0G2JEV5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-1A0A0G2JEV5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-1A0A0G2JEV5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-1A0A0G2JEV5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-1A0A0G2JEV5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-1A0A0G2JEV5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-1A0A0G2JEV5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-1A0A0G2JEV5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-1A0A0G2JEV5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-1A0A0G2JEV5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.19■□□□□ 0.5
Trav7-1A0A0G2JEV5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-1A0A0G2JEV5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-1A0A0G2JEV5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-1A0A0G2JEV5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-1A0A0G2JEV5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-1A0A0G2JEV5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-1A0A0G2JEV5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Trav7-1A0A0G2JEV5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-1A0A0G2JEV5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav7-1A0A0G2JEV5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-1A0A0G2JEV5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-1A0A0G2JEV5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-1A0A0G2JEV5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-1A0A0G2JEV5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-1A0A0G2JEV5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-1A0A0G2JEV5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav7-1A0A0G2JEV5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-1A0A0G2JEV5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav7-1A0A0G2JEV5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-1A0A0G2JEV5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-1A0A0G2JEV5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7-1A0A0G2JEV5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav7-1A0A0G2JEV5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav7-1A0A0G2JEV5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trav7-1A0A0G2JEV5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-1A0A0G2JEV5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-1A0A0G2JEV5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.11■□□□□ 0.49
Trav7-1A0A0G2JEV5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-1A0A0G2JEV5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-1A0A0G2JEV5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-1A0A0G2JEV5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-1A0A0G2JEV5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-1A0A0G2JEV5 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.09■□□□□ 0.49
Trav7-1A0A0G2JEV5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-1A0A0G2JEV5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-1A0A0G2JEV5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-1A0A0G2JEV5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-1A0A0G2JEV5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-1A0A0G2JEV5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-1A0A0G2JEV5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-1A0A0G2JEV5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-1A0A0G2JEV5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav7-1A0A0G2JEV5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-1A0A0G2JEV5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-1A0A0G2JEV5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav7-1A0A0G2JEV5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trav7-1A0A0G2JEV5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-1A0A0G2JEV5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav7-1A0A0G2JEV5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav7-1A0A0G2JEV5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-1A0A0G2JEV5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-1A0A0G2JEV5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav7-1A0A0G2JEV5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms