Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-1A0A0G2JEU8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-1A0A0G2JEU8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav13n-1A0A0G2JEU8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-1A0A0G2JEU8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav13n-1A0A0G2JEU8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.05■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-1A0A0G2JEU8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.04■□□□□ 0.32
Trav13n-1A0A0G2JEU8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.04■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13n-1A0A0G2JEU8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.01■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-1A0A0G2JEU8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-1A0A0G2JEU8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Gm7432-201ENSMUST00000210343 879 ntBASIC17■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav13n-1A0A0G2JEU8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-1A0A0G2JEU8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-1A0A0G2JEU8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.96■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms