Protein–RNA interactions for Protein: A0A0G2JDU3

Igkv20-101-2, Immunoglobulin kappa chain variable 20-101-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv20-101-2A0A0G2JDU3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv20-101-2A0A0G2JDU3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Igkv20-101-2A0A0G2JDU3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv20-101-2A0A0G2JDU3 Gm24970-201ENSMUST00000175582 82 ntBASIC17.97■□□□□ 0.47
Igkv20-101-2A0A0G2JDU3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Gm45855-201ENSMUST00000212546 880 ntBASIC17.95■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.91■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.91■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.9■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Igkv20-101-2A0A0G2JDU3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.89■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.84■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Igkv20-101-2A0A0G2JDU3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.83■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Igkv20-101-2A0A0G2JDU3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.76■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv20-101-2A0A0G2JDU3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms