Protein–RNA interactions for Protein: A0A0B4J1J3

Igkv8-18, Immunoglobulin kappa variable 8-18 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-18A0A0B4J1J3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.78■□□□□ 0.12
Igkv8-18A0A0B4J1J3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Igkv8-18A0A0B4J1J3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Igkv8-18A0A0B4J1J3 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.77■□□□□ 0.12
Igkv8-18A0A0B4J1J3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv8-18A0A0B4J1J3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.71■□□□□ 0.11
Igkv8-18A0A0B4J1J3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Igkv8-18A0A0B4J1J3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-18A0A0B4J1J3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv8-18A0A0B4J1J3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.66■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv8-18A0A0B4J1J3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv8-18A0A0B4J1J3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Peli2-204ENSMUST00000226513 1320 ntBASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.61■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.61■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.6■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Igkv8-18A0A0B4J1J3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv8-18A0A0B4J1J3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Igkv8-18A0A0B4J1J3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.56■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv8-18A0A0B4J1J3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms