Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.99■■□□□ 1.59
Igkv5-43A0A0B4J1J2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.99■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.97■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.97■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.96■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.95■■□□□ 1.59
Igkv5-43A0A0B4J1J2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Igkv5-43A0A0B4J1J2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Igkv5-43A0A0B4J1J2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Igkv5-43A0A0B4J1J2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.93■■□□□ 1.58
Igkv5-43A0A0B4J1J2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Igkv5-43A0A0B4J1J2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Igkv5-43A0A0B4J1J2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Igkv5-43A0A0B4J1J2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Igkv5-43A0A0B4J1J2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.89■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.88■■□□□ 1.57
Igkv5-43A0A0B4J1J2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Igkv5-43A0A0B4J1J2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Gm7432-201ENSMUST00000210343 879 ntBASIC24.83■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Igkv5-43A0A0B4J1J2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Amer2-203ENSMUST00000225247 2662 ntBASIC24.81■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.8■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.79■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Igkv5-43A0A0B4J1J2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Igkv5-43A0A0B4J1J2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
Igkv5-43A0A0B4J1J2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.77■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.77■■□□□ 1.56
Igkv5-43A0A0B4J1J2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Igkv5-43A0A0B4J1J2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Igkv5-43A0A0B4J1J2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Igkv5-43A0A0B4J1J2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.74■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.73■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.73■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.73■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Igkv5-43A0A0B4J1J2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Igkv5-43A0A0B4J1J2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.7■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Gm11599-201ENSMUST00000118720 878 ntBASIC24.69■■□□□ 1.54
Igkv5-43A0A0B4J1J2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.69■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Igkv5-43A0A0B4J1J2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Igkv5-43A0A0B4J1J2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Igkv5-43A0A0B4J1J2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.65■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Particl-201ENSMUST00000205370 1560 ntBASIC24.64■■□□□ 1.54
Igkv5-43A0A0B4J1J2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms