Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16,85■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16,84■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16,84■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16,84■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Gm16148-201ENSMUST00000119653 893 ntBASIC16,84■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16,84■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16,84■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16,83■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16,83■□□□□ 0,28
Igkv4-78A0A0A6YYE5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16,83■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16,83■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16,83■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16,83■□□□□ 0,28
Igkv4-78A0A0A6YYE5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16,82■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16,81■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16,8■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16,8■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16,8■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16,8■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16,79■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16,79■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16,79■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16,78■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16,78■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16,78■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16,78■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16,78■□□□□ 0,28
Igkv4-78A0A0A6YYE5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16,77■□□□□ 0,28
Igkv4-78A0A0A6YYE5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16,77■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16,77■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16,76■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16,76■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16,76■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16,76■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16,76■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16,74■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16,74■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16,73■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16,72■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Igkv4-78A0A0A6YYE5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16,7■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16,7■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16,7■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16,7■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16,7■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16,69■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16,69■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16,69■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16,69■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16,68■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16,68■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16,68■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16,68■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16,67■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16,66■□□□□ 0,26
Igkv4-78A0A0A6YYE5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16,66■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16,66■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16,66■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16,66■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16,66■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16,65■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16,65■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16,65■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16,64■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16,64■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16,64■□□□□ 0,26
Igkv4-78A0A0A6YYE5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16,64■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16,64■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16,64■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16,64■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16,63■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16,63■□□□□ 0,25
Igkv4-78A0A0A6YYE5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16,62■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16,62■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16,62■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16,62■□□□□ 0,25
Igkv4-78A0A0A6YYE5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16,61■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16,61■□□□□ 0,25
Igkv4-78A0A0A6YYE5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16,61■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16,61■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16,6■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16,6■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16,6■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16,6■□□□□ 0,25
Igkv4-78A0A0A6YYE5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16,6■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16,6■□□□□ 0,25
Igkv4-78A0A0A6YYE5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16,59■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16,59■□□□□ 0,25
Igkv4-78A0A0A6YYE5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16,59■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16,59■□□□□ 0,25
Igkv4-78A0A0A6YYE5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16,59■□□□□ 0,25
Retrieved 100 of 76,532 protein–RNA pairs in 18,7 ms