Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-20A0A0A6YX66 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.41■□□□□ 0.7
Ighv1-20A0A0A6YX66 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ighv1-20A0A0A6YX66 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv1-20A0A0A6YX66 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.4■□□□□ 0.7
Ighv1-20A0A0A6YX66 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.39■□□□□ 0.7
Ighv1-20A0A0A6YX66 Gm7432-201ENSMUST00000210343 879 ntBASIC19.39■□□□□ 0.69
Ighv1-20A0A0A6YX66 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ighv1-20A0A0A6YX66 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-20A0A0A6YX66 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-20A0A0A6YX66 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ighv1-20A0A0A6YX66 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-20A0A0A6YX66 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Gm30023-201ENSMUST00000197970 889 ntBASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.37■□□□□ 0.69
Ighv1-20A0A0A6YX66 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-20A0A0A6YX66 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.36■□□□□ 0.69
Ighv1-20A0A0A6YX66 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.36■□□□□ 0.69
Ighv1-20A0A0A6YX66 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-20A0A0A6YX66 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-20A0A0A6YX66 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-20A0A0A6YX66 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.35■□□□□ 0.69
Ighv1-20A0A0A6YX66 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-20A0A0A6YX66 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-20A0A0A6YX66 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-20A0A0A6YX66 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-20A0A0A6YX66 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-20A0A0A6YX66 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-20A0A0A6YX66 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ighv1-20A0A0A6YX66 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-20A0A0A6YX66 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ighv1-20A0A0A6YX66 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-20A0A0A6YX66 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-20A0A0A6YX66 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-20A0A0A6YX66 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-20A0A0A6YX66 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-20A0A0A6YX66 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-20A0A0A6YX66 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.31■□□□□ 0.68
Ighv1-20A0A0A6YX66 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-20A0A0A6YX66 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-20A0A0A6YX66 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.28■□□□□ 0.68
Ighv1-20A0A0A6YX66 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.28■□□□□ 0.68
Ighv1-20A0A0A6YX66 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Ighv1-20A0A0A6YX66 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.28■□□□□ 0.68
Ighv1-20A0A0A6YX66 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-20A0A0A6YX66 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-20A0A0A6YX66 Gm11599-201ENSMUST00000118720 878 ntBASIC19.27■□□□□ 0.68
Ighv1-20A0A0A6YX66 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-20A0A0A6YX66 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-20A0A0A6YX66 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ighv1-20A0A0A6YX66 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Ighv1-20A0A0A6YX66 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-20A0A0A6YX66 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
Ighv1-20A0A0A6YX66 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-20A0A0A6YX66 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ighv1-20A0A0A6YX66 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-20A0A0A6YX66 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-20A0A0A6YX66 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-20A0A0A6YX66 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.23■□□□□ 0.67
Ighv1-20A0A0A6YX66 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-20A0A0A6YX66 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-20A0A0A6YX66 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.22■□□□□ 0.67
Ighv1-20A0A0A6YX66 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ighv1-20A0A0A6YX66 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-20A0A0A6YX66 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-20A0A0A6YX66 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-20A0A0A6YX66 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-20A0A0A6YX66 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-20A0A0A6YX66 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Ighv1-20A0A0A6YX66 Particl-201ENSMUST00000205370 1560 ntBASIC19.2■□□□□ 0.66
Ighv1-20A0A0A6YX66 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ighv1-20A0A0A6YX66 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.19■□□□□ 0.66
Ighv1-20A0A0A6YX66 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-20A0A0A6YX66 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.18■□□□□ 0.66
Ighv1-20A0A0A6YX66 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-20A0A0A6YX66 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-20A0A0A6YX66 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-20A0A0A6YX66 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-20A0A0A6YX66 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.15■□□□□ 0.66
Ighv1-20A0A0A6YX66 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.15■□□□□ 0.66
Ighv1-20A0A0A6YX66 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-20A0A0A6YX66 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-20A0A0A6YX66 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ighv1-20A0A0A6YX66 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-20A0A0A6YX66 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ighv1-20A0A0A6YX66 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.14■□□□□ 0.65
Ighv1-20A0A0A6YX66 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ighv1-20A0A0A6YX66 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms