Protein–RNA interactions for Protein: A0A087WSM5

Gm29049, Predicted gene 29049, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29049A0A087WSM5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm29049A0A087WSM5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm29049A0A087WSM5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.84■□□□□ 0.77
Gm29049A0A087WSM5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm29049A0A087WSM5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Gm29049A0A087WSM5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm29049A0A087WSM5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm29049A0A087WSM5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm29049A0A087WSM5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm29049A0A087WSM5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.82■□□□□ 0.76
Gm29049A0A087WSM5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29049A0A087WSM5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29049A0A087WSM5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Gm29049A0A087WSM5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29049A0A087WSM5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29049A0A087WSM5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29049A0A087WSM5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29049A0A087WSM5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29049A0A087WSM5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29049A0A087WSM5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29049A0A087WSM5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29049A0A087WSM5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gm29049A0A087WSM5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29049A0A087WSM5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29049A0A087WSM5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29049A0A087WSM5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm29049A0A087WSM5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm29049A0A087WSM5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm29049A0A087WSM5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm29049A0A087WSM5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.72■□□□□ 0.75
Gm29049A0A087WSM5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm29049A0A087WSM5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm29049A0A087WSM5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm29049A0A087WSM5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm29049A0A087WSM5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm29049A0A087WSM5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Gm29049A0A087WSM5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm29049A0A087WSM5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Gm29049A0A087WSM5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm29049A0A087WSM5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm29049A0A087WSM5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.68■□□□□ 0.74
Gm29049A0A087WSM5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm29049A0A087WSM5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm29049A0A087WSM5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm29049A0A087WSM5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm29049A0A087WSM5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29049A0A087WSM5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29049A0A087WSM5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29049A0A087WSM5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm29049A0A087WSM5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29049A0A087WSM5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29049A0A087WSM5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm29049A0A087WSM5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29049A0A087WSM5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm29049A0A087WSM5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29049A0A087WSM5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29049A0A087WSM5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29049A0A087WSM5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm29049A0A087WSM5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gm29049A0A087WSM5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29049A0A087WSM5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29049A0A087WSM5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29049A0A087WSM5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm29049A0A087WSM5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29049A0A087WSM5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29049A0A087WSM5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gm29049A0A087WSM5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29049A0A087WSM5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29049A0A087WSM5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm29049A0A087WSM5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29049A0A087WSM5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29049A0A087WSM5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29049A0A087WSM5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm29049A0A087WSM5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Gm29049A0A087WSM5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gm29049A0A087WSM5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm29049A0A087WSM5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm29049A0A087WSM5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm29049A0A087WSM5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm29049A0A087WSM5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm29049A0A087WSM5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm29049A0A087WSM5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Gm29049A0A087WSM5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm29049A0A087WSM5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.56■□□□□ 0.72
Gm29049A0A087WSM5 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.56■□□□□ 0.72
Gm29049A0A087WSM5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm29049A0A087WSM5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm29049A0A087WSM5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.55■□□□□ 0.72
Gm29049A0A087WSM5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm29049A0A087WSM5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm29049A0A087WSM5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.54■□□□□ 0.72
Gm29049A0A087WSM5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm29049A0A087WSM5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms