Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6n-7A0A075B6A6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6n-7A0A075B6A6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6n-7A0A075B6A6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.33■□□□□ 0.84
Trav6n-7A0A075B6A6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6n-7A0A075B6A6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.32■□□□□ 0.84
Trav6n-7A0A075B6A6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.32■□□□□ 0.84
Trav6n-7A0A075B6A6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6n-7A0A075B6A6 Nkain2-201ENSMUST00000092602 558 ntBASIC20.32■□□□□ 0.84
Trav6n-7A0A075B6A6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6n-7A0A075B6A6 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.31■□□□□ 0.84
Trav6n-7A0A075B6A6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav6n-7A0A075B6A6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6n-7A0A075B6A6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6n-7A0A075B6A6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6n-7A0A075B6A6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.3■□□□□ 0.84
Trav6n-7A0A075B6A6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trav6n-7A0A075B6A6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6n-7A0A075B6A6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav6n-7A0A075B6A6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Trav6n-7A0A075B6A6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav6n-7A0A075B6A6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.28■□□□□ 0.84
Trav6n-7A0A075B6A6 Gm6821-201ENSMUST00000107540 542 ntBASIC20.28■□□□□ 0.84
Trav6n-7A0A075B6A6 Gm30023-201ENSMUST00000197970 889 ntBASIC20.28■□□□□ 0.84
Trav6n-7A0A075B6A6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
Trav6n-7A0A075B6A6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.27■□□□□ 0.84
Trav6n-7A0A075B6A6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav6n-7A0A075B6A6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav6n-7A0A075B6A6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6n-7A0A075B6A6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6n-7A0A075B6A6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6n-7A0A075B6A6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6n-7A0A075B6A6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6n-7A0A075B6A6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trav6n-7A0A075B6A6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6n-7A0A075B6A6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6n-7A0A075B6A6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trav6n-7A0A075B6A6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6n-7A0A075B6A6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6n-7A0A075B6A6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6n-7A0A075B6A6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6n-7A0A075B6A6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6n-7A0A075B6A6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trav6n-7A0A075B6A6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6n-7A0A075B6A6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6n-7A0A075B6A6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trav6n-7A0A075B6A6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6n-7A0A075B6A6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6n-7A0A075B6A6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trav6n-7A0A075B6A6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6n-7A0A075B6A6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6n-7A0A075B6A6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6n-7A0A075B6A6 Gm8503-201ENSMUST00000118131 455 ntBASIC20.18■□□□□ 0.82
Trav6n-7A0A075B6A6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6n-7A0A075B6A6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6n-7A0A075B6A6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6n-7A0A075B6A6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6n-7A0A075B6A6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6n-7A0A075B6A6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.16■□□□□ 0.82
Trav6n-7A0A075B6A6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6n-7A0A075B6A6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.15■□□□□ 0.82
Trav6n-7A0A075B6A6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav6n-7A0A075B6A6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Trav6n-7A0A075B6A6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trav6n-7A0A075B6A6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Trav6n-7A0A075B6A6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6n-7A0A075B6A6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6n-7A0A075B6A6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6n-7A0A075B6A6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6n-7A0A075B6A6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6n-7A0A075B6A6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6n-7A0A075B6A6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.12■□□□□ 0.81
Trav6n-7A0A075B6A6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.12■□□□□ 0.81
Trav6n-7A0A075B6A6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.12■□□□□ 0.81
Trav6n-7A0A075B6A6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6n-7A0A075B6A6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav6n-7A0A075B6A6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6n-7A0A075B6A6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6n-7A0A075B6A6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6n-7A0A075B6A6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6n-7A0A075B6A6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6n-7A0A075B6A6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trav6n-7A0A075B6A6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav6n-7A0A075B6A6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6n-7A0A075B6A6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6n-7A0A075B6A6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6n-7A0A075B6A6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6n-7A0A075B6A6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.08■□□□□ 0.81
Trav6n-7A0A075B6A6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trav6n-7A0A075B6A6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.07■□□□□ 0.8
Trav6n-7A0A075B6A6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav6n-7A0A075B6A6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6n-7A0A075B6A6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms