Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav10nA0A075B622 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trav10nA0A075B622 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav10nA0A075B622 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav10nA0A075B622 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav10nA0A075B622 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav10nA0A075B622 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav10nA0A075B622 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav10nA0A075B622 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Trav10nA0A075B622 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav10nA0A075B622 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav10nA0A075B622 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav10nA0A075B622 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav10nA0A075B622 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav10nA0A075B622 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav10nA0A075B622 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav10nA0A075B622 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trav10nA0A075B622 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.13■□□□□ 0.97
Trav10nA0A075B622 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Trav10nA0A075B622 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav10nA0A075B622 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav10nA0A075B622 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav10nA0A075B622 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav10nA0A075B622 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav10nA0A075B622 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.09■□□□□ 0.97
Trav10nA0A075B622 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav10nA0A075B622 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav10nA0A075B622 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav10nA0A075B622 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav10nA0A075B622 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav10nA0A075B622 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.08■□□□□ 0.97
Trav10nA0A075B622 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav10nA0A075B622 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trav10nA0A075B622 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav10nA0A075B622 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trav10nA0A075B622 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.06■□□□□ 0.96
Trav10nA0A075B622 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav10nA0A075B622 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trav10nA0A075B622 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav10nA0A075B622 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav10nA0A075B622 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav10nA0A075B622 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav10nA0A075B622 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav10nA0A075B622 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trav10nA0A075B622 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav10nA0A075B622 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.02■□□□□ 0.95
Trav10nA0A075B622 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav10nA0A075B622 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav10nA0A075B622 Gm30023-201ENSMUST00000197970 889 ntBASIC21■□□□□ 0.95
Trav10nA0A075B622 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav10nA0A075B622 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav10nA0A075B622 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trav10nA0A075B622 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Trav10nA0A075B622 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.97■□□□□ 0.95
Trav10nA0A075B622 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trav10nA0A075B622 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav10nA0A075B622 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav10nA0A075B622 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav10nA0A075B622 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trav10nA0A075B622 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trav10nA0A075B622 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav10nA0A075B622 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav10nA0A075B622 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav10nA0A075B622 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav10nA0A075B622 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trav10nA0A075B622 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav10nA0A075B622 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trav10nA0A075B622 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav10nA0A075B622 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav10nA0A075B622 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trav10nA0A075B622 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav10nA0A075B622 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav10nA0A075B622 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav10nA0A075B622 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav10nA0A075B622 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav10nA0A075B622 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trav10nA0A075B622 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav10nA0A075B622 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav10nA0A075B622 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav10nA0A075B622 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trav10nA0A075B622 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav10nA0A075B622 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav10nA0A075B622 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Trav10nA0A075B622 Nkain2-201ENSMUST00000092602 558 ntBASIC20.9■□□□□ 0.94
Trav10nA0A075B622 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms