Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trav5-1A0A075B5Z7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-1A0A075B5Z7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-1A0A075B5Z7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-1A0A075B5Z7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-1A0A075B5Z7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav5-1A0A075B5Z7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav5-1A0A075B5Z7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav5-1A0A075B5Z7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav5-1A0A075B5Z7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav5-1A0A075B5Z7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav5-1A0A075B5Z7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav5-1A0A075B5Z7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.71■□□□□ 0.91
Trav5-1A0A075B5Z7 Gm30023-201ENSMUST00000197970 889 ntBASIC20.71■□□□□ 0.91
Trav5-1A0A075B5Z7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.71■□□□□ 0.91
Trav5-1A0A075B5Z7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trav5-1A0A075B5Z7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav5-1A0A075B5Z7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.69■□□□□ 0.9
Trav5-1A0A075B5Z7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.69■□□□□ 0.9
Trav5-1A0A075B5Z7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.69■□□□□ 0.9
Trav5-1A0A075B5Z7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav5-1A0A075B5Z7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav5-1A0A075B5Z7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.68■□□□□ 0.9
Trav5-1A0A075B5Z7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav5-1A0A075B5Z7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Trav5-1A0A075B5Z7 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.67■□□□□ 0.9
Trav5-1A0A075B5Z7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav5-1A0A075B5Z7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav5-1A0A075B5Z7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav5-1A0A075B5Z7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav5-1A0A075B5Z7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav5-1A0A075B5Z7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav5-1A0A075B5Z7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav5-1A0A075B5Z7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.64■□□□□ 0.89
Trav5-1A0A075B5Z7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.64■□□□□ 0.89
Trav5-1A0A075B5Z7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-1A0A075B5Z7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-1A0A075B5Z7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-1A0A075B5Z7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-1A0A075B5Z7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-1A0A075B5Z7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-1A0A075B5Z7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-1A0A075B5Z7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-1A0A075B5Z7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-1A0A075B5Z7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Trav5-1A0A075B5Z7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Trav5-1A0A075B5Z7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.61■□□□□ 0.89
Trav5-1A0A075B5Z7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trav5-1A0A075B5Z7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trav5-1A0A075B5Z7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav5-1A0A075B5Z7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav5-1A0A075B5Z7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav5-1A0A075B5Z7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav5-1A0A075B5Z7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
Trav5-1A0A075B5Z7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.58■□□□□ 0.89
Trav5-1A0A075B5Z7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.58■□□□□ 0.89
Trav5-1A0A075B5Z7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Trav5-1A0A075B5Z7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.56■□□□□ 0.88
Trav5-1A0A075B5Z7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
Trav5-1A0A075B5Z7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav5-1A0A075B5Z7 Particl-201ENSMUST00000205370 1560 ntBASIC20.55■□□□□ 0.88
Trav5-1A0A075B5Z7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav5-1A0A075B5Z7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav5-1A0A075B5Z7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.55■□□□□ 0.88
Trav5-1A0A075B5Z7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav5-1A0A075B5Z7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trav5-1A0A075B5Z7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.53■□□□□ 0.88
Trav5-1A0A075B5Z7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav5-1A0A075B5Z7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.52■□□□□ 0.88
Trav5-1A0A075B5Z7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav5-1A0A075B5Z7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav5-1A0A075B5Z7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav5-1A0A075B5Z7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Trav5-1A0A075B5Z7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trav5-1A0A075B5Z7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav5-1A0A075B5Z7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav5-1A0A075B5Z7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trav5-1A0A075B5Z7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav5-1A0A075B5Z7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav5-1A0A075B5Z7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav5-1A0A075B5Z7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav5-1A0A075B5Z7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trav5-1A0A075B5Z7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav5-1A0A075B5Z7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav5-1A0A075B5Z7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav5-1A0A075B5Z7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav5-1A0A075B5Z7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trav5-1A0A075B5Z7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav5-1A0A075B5Z7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Trav5-1A0A075B5Z7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav5-1A0A075B5Z7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trav5-1A0A075B5Z7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms