Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AP005329.3-201ENST00000609924 686 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AC015871.3-201ENST00000618835 2261 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 OR5M2P-202ENST00000641241 4242 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 CDY19P-201ENST00000411668 1613 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 CDY18P-201ENST00000438294 1609 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 TRIM53CP-201ENST00000531490 1354 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC009220.2-201ENST00000489759 1751 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 MIR640-201ENST00000385086 96 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 RN7SL160P-201ENST00000468558 284 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 RN7SL705P-201ENST00000481678 294 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 SUMO2P7-201ENST00000511179 285 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC096708.2-201ENST00000577676 512 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC011447.2-201ENST00000592921 283 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AL450226.2-201ENST00000622913 439 ntBASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP2Q9UDT6 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AP002800.1-201ENST00000624982 2225 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 RN7SKP118-201ENST00000364331 330 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 RNA5SP176-201ENST00000390956 110 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 RBBP4P4-201ENST00000398588 1289 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC018804.1-201ENST00000430381 618 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AP000805.1-201ENST00000471604 784 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC021820.1-201ENST00000525564 808 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AL132640.1-201ENST00000559594 619 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC009955.2-201ENST00000597288 542 ntBASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP2Q9UDT6 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms