Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC8.75□□□□□ -1.01
ERCC3P19447 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.75□□□□□ -1.01
ERCC3P19447 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.75□□□□□ -1.01
ERCC3P19447 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.75□□□□□ -1.01
ERCC3P19447 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 AL627224.1-201ENST00000448334 444 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 AC069277.2-201ENST00000454211 432 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 SNORA35.1-201ENST00000458908 128 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 AL928654.1-201ENST00000476081 354 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.75□□□□□ -1.01
ERCC3P19447 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC8.75□□□□□ -1.01
ERCC3P19447 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 OR4A17P-201ENST00000526032 904 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 AC087257.2-201ENST00000538759 928 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC8.75□□□□□ -1.01
ERCC3P19447 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.75□□□□□ -1.01
ERCC3P19447 MTATP6P24-201ENST00000576835 677 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC8.75□□□□□ -1.01
ERCC3P19447 AC022001.1-201ENST00000605193 268 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 AC004908.3-201ENST00000610248 625 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 AL357556.1-201ENST00000421884 1388 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 ZNF101P1-201ENST00000435701 1720 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 AC126474.2-201ENST00000623268 1750 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.74□□□□□ -1.01
ERCC3P19447 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 SOD1P1-201ENST00000407803 440 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 AL139100.1-201ENST00000408001 498 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 RN7SKP137-201ENST00000411074 307 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 RMRPP5-201ENST00000411156 267 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 TRBV26OR9-2-201ENST00000432077 293 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.74□□□□□ -1.01
ERCC3P19447 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 MTND2P32-201ENST00000521584 1038 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 AP004833.3-201ENST00000531893 322 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC106730.2-201ENST00000566641 540 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 PPIAP14-201ENST00000577627 496 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 MIR4509-3-201ENST00000578671 94 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 RN7SL131P-201ENST00000579043 256 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 MIR4509-2-201ENST00000583920 94 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.74□□□□□ -1.01
ERCC3P19447 RNU6-1192P-201ENST00000612197 107 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 MIR4509-1-201ENST00000618224 94 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 RNU6-489P-201ENST00000618289 107 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.74□□□□□ -1.01
ERCC3P19447 AL451054.1-201ENST00000621770 772 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 AC093909.6-201ENST00000624757 775 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.74□□□□□ -1.01
ERCC3P19447 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms