Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL360271.1-201ENST00000395679 510 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 RN7SKP168-201ENST00000410910 300 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 RPS17P17-201ENST00000419392 409 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC068790.1-201ENST00000536166 355 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL078623.1-201ENST00000602702 907 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC018737.1-201ENST00000603900 204 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC008385.1-201ENST00000604421 355 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 CUX2P1-201ENST00000606426 298 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 BX649601.1-201ENST00000608264 572 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ELMO2P1-202ENST00000614283 794 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AP000356.4-201ENST00000639500 172 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AP001153.1-201ENST00000641024 338 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 AP002512.4-202ENST00000641599 4530 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 AL161901.1-201ENST00000624954 3425 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 FAM204BP-201ENST00000369171 701 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 LCN1P2-201ENST00000372030 223 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 MIR654-201ENST00000385199 81 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 SNORA35-201ENST00000386104 128 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 RN7SL201P-201ENST00000482306 296 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 AC122713.1-201ENST00000518368 1015 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 IGKV2OR22-4-201ENST00000523309 367 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 OR7E96P-201ENST00000530816 976 ntBASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.41□□□□□ -1.54
RBFOX3A6NFN3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms