Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RN7SKP55-201ENST00000364888 307 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 GRPEL2P2-201ENST00000421856 670 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC027124.1-201ENST00000440852 466 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 MRPL49P1-201ENST00000505951 535 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 OR7E161P-201ENST00000533722 967 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC007537.1-201ENST00000539347 327 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC011611.6-201ENST00000547483 255 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC079949.2-201ENST00000617117 2933 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC007485.2-201ENST00000623493 1667 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 RNA5SP114-201ENST00000363780 113 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AL359715.1-201ENST00000404330 555 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 SLC25A5P7-201ENST00000406156 896 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 RPL7AP71-201ENST00000451120 739 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 MEF2AP1-201ENST00000454867 863 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 BX323845.2-201ENST00000458382 234 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AL591122.1-201ENST00000487348 492 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 OR4C1P-201ENST00000530880 937 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AP004607.5-201ENST00000532034 217 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 OR7A11P-201ENST00000597719 953 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 CYCSP1-201ENST00000604815 315 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 CDY10P-201ENST00000452415 1567 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 BRD7P1-201ENST00000557705 1915 ntBASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO3Q9BXY4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
RSPO3Q9BXY4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms