Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MTCO3P43-201ENST00000440974 771 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 GXYLT1P1-201ENST00000446657 490 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC026336.1-201ENST00000466577 351 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC074386.1-206ENST00000487102 761 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 RPL5P11-201ENST00000498068 893 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 EIF3KP1-201ENST00000513279 656 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 SNORA26.10-201ENST00000516427 141 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 IGLV10-67-201ENST00000519446 325 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 OR7E96P-201ENST00000530816 976 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 OR5F2P-201ENST00000532761 941 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AL365223.1-201ENST00000574864 1297 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 MIR4301-201ENST00000577203 66 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC022239.4-201ENST00000602626 504 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC116165.3-201ENST00000614524 400 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC021766.1-201ENST00000624404 741 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC004808.2-201ENST00000627965 773 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC106858.1-201ENST00000637497 429 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AP000842.4-201ENST00000638781 748 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 MAPK10-344ENST00000641718 3746 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AL133320.1-201ENST00000621423 2352 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC079178.2-201ENST00000439323 1624 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AP003486.1-201ENST00000525716 3994 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 KRT18P52-201ENST00000404956 846 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 RN7SKP225-201ENST00000410405 352 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC023141.1-201ENST00000419418 379 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC019185.3-201ENST00000438805 323 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 SNX18P9-201ENST00000440580 835 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 VN1R48P-201ENST00000448149 1036 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AP000547.1-201ENST00000454360 617 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 HMGN1P8-201ENST00000463578 288 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC015820.1-201ENST00000473882 321 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 RN7SL282P-201ENST00000479676 297 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC066616.1-201ENST00000486795 413 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC008677.3-201ENST00000519146 666 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms