Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 SNX18P3-202ENST00000565670 1750 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 FUNDC2P3-201ENST00000334716 533 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 RNU1-38P-201ENST00000362817 144 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 RNA5SP396-201ENST00000364834 120 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 RNU6-167P-201ENST00000384292 106 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 RPL12P10-201ENST00000413498 498 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AL773545.3-201ENST00000414297 706 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 RPSAP1-201ENST00000421328 880 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 GRPEL2P2-201ENST00000421856 670 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 CLIC4P3-201ENST00000422221 752 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 Z83313.1-201ENST00000433780 718 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC234771.3-201ENST00000454984 622 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC018892.2-201ENST00000457656 693 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC009153.1-201ENST00000485799 496 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC008040.4-201ENST00000494834 768 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC055733.3-201ENST00000505214 523 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC108120.1-201ENST00000506543 991 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC016559.1-201ENST00000511420 199 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 UBE2CP4-201ENST00000561405 535 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC138749.2-201ENST00000566048 167 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC099777.1-201ENST00000603779 1070 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 CYCSP1-201ENST00000604815 315 ntBASIC6.91□□□□□ -1.3
VMP1Q96GC9 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VMP1Q96GC9 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VMP1Q96GC9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VMP1Q96GC9 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VMP1Q96GC9 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VMP1Q96GC9 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VMP1Q96GC9 RNA5SP238-201ENST00000365464 120 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 ARMCX7P-201ENST00000372828 562 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 RPL7P58-201ENST00000402913 758 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AL355862.1-201ENST00000412705 353 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 RHEBP1-201ENST00000448647 556 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AL929410.2-201ENST00000451170 189 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 RN7SL791P-201ENST00000467868 295 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 MRPL49P1-201ENST00000505951 535 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 GCSHP1-201ENST00000512554 484 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC090539.2-201ENST00000523425 671 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 FRG2IP-201ENST00000563581 781 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 RN7SL697P-201ENST00000582484 299 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 IGLJCOR18-201ENST00000584002 424 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.9□□□□□ -1.3
VMP1Q96GC9 AC093909.6-201ENST00000624757 775 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VMP1Q96GC9 SAMMSON-203ENST00000641005 2168 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 SAMMSON-210ENST00000641260 1308 ntBASIC6.9□□□□□ -1.3
VMP1Q96GC9 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VMP1Q96GC9 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
VMP1Q96GC9 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.9□□□□□ -1.31
VMP1Q96GC9 HDAC1P1-201ENST00000455482 1445 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms