Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
H3F3AP84243 RNU1-56P-201ENST00000391303 164 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 RNA5SP280-201ENST00000411230 115 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AL139135.1-201ENST00000412675 209 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 MICG-208ENST00000416822 132 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3AP84243 SNRPEP5-201ENST00000425442 278 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3AP84243 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC239800.1-201ENST00000442049 719 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 RPS7P4-201ENST00000444127 582 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3AP84243 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 AL354714.5-201ENST00000450131 590 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 OR7E7P-201ENST00000455678 1012 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AC135721.2-201ENST00000464237 300 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 RPL7AP30-201ENST00000482859 796 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 RN7SKP98-201ENST00000517070 156 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 EEF1B2P2-201ENST00000519625 676 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 SSU72P6-201ENST00000532644 488 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AC091932.1-201ENST00000569381 427 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3AP84243 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC024085.1-201ENST00000604299 432 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AC103564.3-201ENST00000621194 220 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC011471.4-201ENST00000638271 216 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 TMEM14EP-202ENST00000639378 1296 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AL596275.2-208ENST00000641192 594 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 AC093844.1-201ENST00000514910 1361 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 Z93929.1-201ENST00000418200 1475 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 AC102941.1-201ENST00000567616 1537 ntBASIC6.25□□□□□ -1.41
H3F3AP84243 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H3F3AP84243 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3F3AP84243 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 AC138915.4-201ENST00000565549 4147 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3AP84243 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
H3F3AP84243 AP002800.1-201ENST00000624982 2225 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3F3AP84243 RN7SKP137-201ENST00000411074 307 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3AP84243 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 OR52S1P-201ENST00000427016 937 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3F3AP84243 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3AP84243 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 AL158214.1-201ENST00000444423 404 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 AP000805.1-201ENST00000471604 784 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 RPS16P9-201ENST00000477220 427 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.24□□□□□ -1.41
H3F3AP84243 RN7SL518P-201ENST00000491887 280 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 AL135933.1-201ENST00000498657 802 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3AP84243 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
H3F3AP84243 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.24□□□□□ -1.41
H3F3AP84243 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.24□□□□□ -1.41
H3F3AP84243 AL135978.1-201ENST00000553618 1266 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 MRPS21P9-201ENST00000571150 257 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 MIR5682-201ENST00000584864 76 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
H3F3AP84243 ACTG1P22-201ENST00000603793 1099 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 AC023206.1-201ENST00000605824 298 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 AC073263.3-201ENST00000624449 858 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3AP84243 AC006453.3-201ENST00000635891 377 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.24□□□□□ -1.41
H3F3AP84243 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3AP84243 AL137918.1-201ENST00000624542 1922 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms