Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC087752.2-201ENST00000521219 281 ntBASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AP001646.2-201ENST00000528645 1156 ntBASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AL049840.6-202ENST00000603373 279 ntBASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AL161931.1-201ENST00000612768 246 ntBASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AC026951.2-201ENST00000613847 241 ntBASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 ATP5BP1-201ENST00000411980 1574 ntBASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RSPO3Q9BXY4 AC091544.5-201ENST00000620192 3815 ntBASIC6.34□□□□□ -1.4
RSPO3Q9BXY4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RSPO3Q9BXY4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
RSPO3Q9BXY4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.34□□□□□ -1.4
RSPO3Q9BXY4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.34□□□□□ -1.4
RSPO3Q9BXY4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RSPO3Q9BXY4 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC074375.1-201ENST00000372993 192 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 SUMO2P10-201ENST00000452006 288 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 SULT1D1P-201ENST00000458020 882 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC011352.2-201ENST00000514574 1016 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC107952.1-201ENST00000524200 376 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 MIR1273F-201ENST00000580581 99 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC090241.1-201ENST00000587732 621 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC020914.7-201ENST00000594477 545 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AL031429.2-201ENST00000602605 649 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC099777.1-201ENST00000603779 1070 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC012629.3-201ENST00000623397 328 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC099654.15-201ENST00000639802 509 ntBASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.33□□□□□ -1.4
RSPO3Q9BXY4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AL590065.1-201ENST00000603371 4774 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 CDY5P-201ENST00000411487 1580 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 CDY9P-201ENST00000451397 1580 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC097634.1-201ENST00000604491 2467 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 AC102941.1-201ENST00000567616 1537 ntBASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.32□□□□□ -1.4
RSPO3Q9BXY4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms