Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RPS4XP23-201ENST00000487801 237 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 PGAM4P2-201ENST00000512491 721 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 OR7E154P-201ENST00000525174 932 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RPS7P1-201ENST00000571702 585 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RN7SL667P-201ENST00000582817 298 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RPSAP66-201ENST00000592196 606 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RN7SL778P-201ENST00000607160 297 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 uc_338.37-201ENST00000620113 186 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC211433.3-201ENST00000623770 375 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC073488.7-201ENST00000633785 778 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AL359195.2-201ENST00000623657 4412 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC079949.2-201ENST00000617117 2933 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ASNSP6-201ENST00000592770 1618 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AL589993.1-201ENST00000407450 2524 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 Y_RNA.209-201ENST00000364156 111 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 SNORA30B-201ENST00000365319 129 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC093107.1-201ENST00000422772 609 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AL121916.1-201ENST00000429405 308 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC073900.1-201ENST00000429766 776 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AL139135.2-201ENST00000445040 433 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC093799.1-201ENST00000452411 499 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 RN7SL91P-201ENST00000469313 291 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 RN7SL182P-201ENST00000496499 300 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 ATP5J2P4-201ENST00000538774 267 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC126177.6-201ENST00000550420 1009 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AL049869.4-201ENST00000555669 178 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC243312.1-201ENST00000570582 275 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 RN7SL311P-201ENST00000579858 306 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 PRR13P3-201ENST00000603578 376 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AL139123.1-201ENST00000612008 430 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 MIR6807-201ENST00000621968 92 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC004943.1-203ENST00000624370 1074 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC112243.1-201ENST00000623949 3851 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 DDX43P1-201ENST00000510713 1763 ntBASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDD3Q9Y3P4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 LCOR-201ENST00000286067 4542 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms