Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 OR13Z2P-201ENST00000606338 555 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AL731533.2-201ENST00000607898 578 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC239600.2-201ENST00000619615 1165 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 METAP1-212ENST00000625963 147 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC020978.6-201ENST00000571197 3177 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 IMMTP1-201ENST00000435590 2219 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 TRIM60P14-201ENST00000513444 1419 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC006511.2-201ENST00000388966 660 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 STSP1-201ENST00000412493 1151 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AL590399.4-201ENST00000436561 601 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AL034399.1-201ENST00000451535 380 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 EAF2-202ENST00000451944 960 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 RN7SL520P-201ENST00000474110 286 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC120057.1-201ENST00000483947 663 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC008967.1-201ENST00000504843 163 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 GAPDHP31-201ENST00000509325 1014 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC139713.1-202ENST00000512366 460 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 OR6M3P-201ENST00000531567 700 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC126177.6-201ENST00000550420 1009 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC034105.2-201ENST00000561866 238 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 DNM1P31-201ENST00000564149 696 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 MIR4664-201ENST00000583819 71 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC010463.3-201ENST00000594077 500 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC105339.4-201ENST00000624471 737 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 FLII-230ENST00000628188 156 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC241377.2-202ENST00000636462 997 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 AC074198.1-201ENST00000506546 1397 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 BCORP1-203ENST00000513194 5093 ntBASIC5.24□□□□□ -1.57
AP1S3Q96PC3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP1S3Q96PC3 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 EEF1A1P15-201ENST00000395772 1408 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC061975.5-201ENST00000584928 1441 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms