Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
RHBDL3P58872 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 Z99129.4-201ENST00000624649 2435 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
RHBDL3P58872 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
RHBDL3P58872 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RHBDL3P58872 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 RN7SKP189-201ENST00000365042 330 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AC026310.1-201ENST00000396004 378 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 AHCYP8-201ENST00000425108 209 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 KATNBL1P2-201ENST00000433311 835 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AL121578.2-201ENST00000448797 447 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.33□□□□□ -1.08
RHBDL3P58872 PSMA6P2-201ENST00000457574 686 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.33□□□□□ -1.08
RHBDL3P58872 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.33□□□□□ -1.08
RHBDL3P58872 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.33□□□□□ -1.08
RHBDL3P58872 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.33□□□□□ -1.08
RHBDL3P58872 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.33□□□□□ -1.08
RHBDL3P58872 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.33□□□□□ -1.08
RHBDL3P58872 RN7SL66P-201ENST00000582099 264 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.33□□□□□ -1.08
RHBDL3P58872 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 AP005212.3-201ENST00000619964 528 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AP002364.1-201ENST00000623330 3386 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AL137058.3-201ENST00000624531 3099 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 TOPORSLP1-201ENST00000467693 2102 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.33□□□□□ -1.08
RHBDL3P58872 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.33□□□□□ -1.08
RHBDL3P58872 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.33□□□□□ -1.08
RHBDL3P58872 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.33□□□□□ -1.08
RHBDL3P58872 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RHBDL3P58872 AP000641.1-201ENST00000531988 1639 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 ABCA11P-202ENST00000504019 2110 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.32□□□□□ -1.08
RHBDL3P58872 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 RN7SL870P-201ENST00000460111 296 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 RN7SL390P-201ENST00000470634 284 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 RN7SL70P-201ENST00000478322 302 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 RN7SL379P-201ENST00000479912 293 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AP005902.2-201ENST00000518393 307 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC007537.1-201ENST00000539347 327 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC026458.1-201ENST00000564330 438 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms