Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL590682.1-201ENST00000437248 344 ntBASIC6.47□□□□□ -1.37
SSX4O60224 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.47□□□□□ -1.37
SSX4O60224 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX4O60224 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX4O60224 NDUFB4P1-201ENST00000462398 381 ntBASIC6.47□□□□□ -1.37
SSX4O60224 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 AC079768.1-201ENST00000503181 711 ntBASIC6.47□□□□□ -1.37
SSX4O60224 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX4O60224 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX4O60224 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX4O60224 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX4O60224 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX4O60224 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC010463.3-201ENST00000594077 500 ntBASIC6.47□□□□□ -1.37
SSX4O60224 AL512430.4-201ENST00000603085 613 ntBASIC6.47□□□□□ -1.37
SSX4O60224 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC016590.3-201ENST00000611171 753 ntBASIC6.47□□□□□ -1.37
SSX4O60224 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC099654.15-201ENST00000639802 509 ntBASIC6.47□□□□□ -1.37
SSX4O60224 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSX4O60224 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSX4O60224 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX4O60224 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX4O60224 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
SSX4O60224 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX4O60224 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX4O60224 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.46□□□□□ -1.37
SSX4O60224 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX4O60224 DDX50P1-201ENST00000438163 2400 ntBASIC6.46□□□□□ -1.38
SSX4O60224 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
SSX4O60224 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 RN7SKP174-201ENST00000363803 330 ntBASIC6.46□□□□□ -1.38
SSX4O60224 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AL139135.1-201ENST00000412675 209 ntBASIC6.46□□□□□ -1.38
SSX4O60224 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 AC023141.10-201ENST00000415634 200 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AL161742.1-201ENST00000418154 584 ntBASIC6.46□□□□□ -1.38
SSX4O60224 TAS2R2P-201ENST00000421146 910 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX4O60224 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 KYNUP1-201ENST00000466683 1406 ntBASIC6.46□□□□□ -1.38
SSX4O60224 TUBBP11-201ENST00000472255 252 ntBASIC6.46□□□□□ -1.38
SSX4O60224 RPS10P28-201ENST00000480396 498 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX4O60224 RN7SL388P-201ENST00000498736 339 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AL445187.1-201ENST00000502685 260 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.46□□□□□ -1.38
SSX4O60224 MTND6P19-201ENST00000519399 524 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.46□□□□□ -1.38
SSX4O60224 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.46□□□□□ -1.38
SSX4O60224 NF1P12-201ENST00000549593 583 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.46□□□□□ -1.38
SSX4O60224 AC138749.2-201ENST00000566048 167 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.46□□□□□ -1.38
SSX4O60224 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
SSX4O60224 AL589765.5-201ENST00000596133 515 ntBASIC6.46□□□□□ -1.38
SSX4O60224 AC103724.4-201ENST00000605981 292 ntBASIC6.46□□□□□ -1.38
SSX4O60224 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX4O60224 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX4O60224 AL139384.2-201ENST00000613809 3590 ntBASIC6.46□□□□□ -1.38
SSX4O60224 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX4O60224 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX4O60224 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX4O60224 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms