Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3F3CQ6NXT2 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.58□□□□□ -1.36
H3F3CQ6NXT2 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 OR2A3P-202ENST00000641249 1776 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 ST13P21-201ENST00000453250 1098 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 PGAM4P2-201ENST00000512491 721 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AC027801.3-201ENST00000515049 698 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 EIF4A3P1-201ENST00000578499 647 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 RPS27AP19-201ENST00000597285 458 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 RN7SL126P-201ENST00000616400 299 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AC005899.6-201ENST00000620729 297 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 KARSP2-201ENST00000415696 1639 ntBASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H3F3CQ6NXT2 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC138915.4-201ENST00000565549 4147 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC089998.1-201ENST00000548575 3141 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC005614.1-201ENST00000598952 3653 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 RN7SKP254-201ENST00000410685 310 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 GAPDHP16-201ENST00000448152 962 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 RPSAP24-201ENST00000461543 873 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 RN7SL267P-201ENST00000485107 261 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AP005202.1-201ENST00000489915 867 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 SCARNA6-201ENST00000515982 265 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC120036.3-201ENST00000517826 292 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC008626.2-201ENST00000624425 248 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC127071.1-201ENST00000624997 712 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 TMEM14EP-202ENST00000639378 1296 ntBASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
H3F3CQ6NXT2 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms