Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 CREM-214ENST00000395887 849 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 RPSAP72-201ENST00000407020 358 ntBASIC5.91□□□□□ -1.46
CDX1P47902 RPL34P19-201ENST00000415903 342 ntBASIC5.91□□□□□ -1.46
CDX1P47902 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 GAPDHP51-201ENST00000426454 1000 ntBASIC5.91□□□□□ -1.46
CDX1P47902 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 LDHAP2-201ENST00000437325 985 ntBASIC5.91□□□□□ -1.46
CDX1P47902 CR391992.1-201ENST00000438601 394 ntBASIC5.91□□□□□ -1.46
CDX1P47902 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 RN7SL834P-201ENST00000461450 286 ntBASIC5.91□□□□□ -1.46
CDX1P47902 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.91□□□□□ -1.46
CDX1P47902 CREM-224ENST00000468236 582 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 RN7SL58P-201ENST00000473445 294 ntBASIC5.91□□□□□ -1.46
CDX1P47902 CREM-234ENST00000484283 660 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 HMGB3P14-201ENST00000494195 599 ntBASIC5.91□□□□□ -1.46
CDX1P47902 RPL5P11-201ENST00000498068 893 ntBASIC5.91□□□□□ -1.46
CDX1P47902 SNORD116-30-201ENST00000516468 85 ntBASIC5.91□□□□□ -1.46
CDX1P47902 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 AL365223.1-201ENST00000574864 1297 ntBASIC5.91□□□□□ -1.46
CDX1P47902 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 AC018690.1-201ENST00000608144 626 ntBASIC5.91□□□□□ -1.46
CDX1P47902 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 AC002044.3-201ENST00000623314 541 ntBASIC5.91□□□□□ -1.46
CDX1P47902 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC5.91□□□□□ -1.46
CDX1P47902 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 AC022306.1-201ENST00000560489 1562 ntBASIC5.91□□□□□ -1.46
CDX1P47902 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 AL033543.1-201ENST00000623440 13454 ntBASIC5.91□□□□□ -1.46
CDX1P47902 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 AL606490.2-201ENST00000457562 1330 ntBASIC5.91□□□□□ -1.46
CDX1P47902 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 AC006600.2-201ENST00000624834 2506 ntBASIC5.91□□□□□ -1.46
CDX1P47902 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 AL590065.1-201ENST00000603371 4774 ntBASIC5.91□□□□□ -1.46
CDX1P47902 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDX1P47902 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CDX1P47902 TRIM60P14-201ENST00000513444 1419 ntBASIC5.91□□□□□ -1.46
CDX1P47902 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDX1P47902 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC5.9□□□□□ -1.46
CDX1P47902 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.9□□□□□ -1.46
CDX1P47902 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDX1P47902 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CDX1P47902 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.9□□□□□ -1.46
CDX1P47902 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.9□□□□□ -1.46
CDX1P47902 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
CDX1P47902 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CDX1P47902 MIR301B-201ENST00000390813 78 ntBASIC5.9□□□□□ -1.46
CDX1P47902 U3.31-201ENST00000408113 216 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC5.9□□□□□ -1.46
CDX1P47902 GAPDHP73-201ENST00000423411 1007 ntBASIC5.9□□□□□ -1.46
CDX1P47902 FECHP1-201ENST00000431896 1214 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.9□□□□□ -1.46
CDX1P47902 AC019185.3-201ENST00000438805 323 ntBASIC5.9□□□□□ -1.46
CDX1P47902 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC5.9□□□□□ -1.46
CDX1P47902 AL031736.1-201ENST00000449688 618 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AL591379.2-201ENST00000450223 397 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AC114755.1-201ENST00000453101 868 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AC012493.1-201ENST00000453252 760 ntBASIC5.9□□□□□ -1.46
CDX1P47902 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC5.9□□□□□ -1.46
CDX1P47902 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CDX1P47902 SUMO2P17-201ENST00000504438 285 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AP001960.1-201ENST00000506494 658 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AC113398.2-201ENST00000507630 558 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AP004833.1-201ENST00000507987 1238 ntBASIC5.9□□□□□ -1.46
CDX1P47902 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC5.9□□□□□ -1.46
CDX1P47902 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
CDX1P47902 AC117383.2-201ENST00000514722 322 ntBASIC5.9□□□□□ -1.46
CDX1P47902 RN7SKP5-201ENST00000517045 272 ntBASIC5.9□□□□□ -1.46
CDX1P47902 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
CDX1P47902 AC008676.3-201ENST00000521237 435 ntBASIC5.9□□□□□ -1.46
CDX1P47902 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDX1P47902 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.9□□□□□ -1.46
CDX1P47902 AC012181.2-201ENST00000570210 699 ntBASIC5.9□□□□□ -1.46
CDX1P47902 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms